Misgurnus anguillicaudatus (oriental weatherfish): 129447858
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Entry
129447858 CDS
T09481
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129447858 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129447858 (u2af2a)
Spliceosome [BR:
manu03041
]
Complex A
U2 snRNP components
U2 related factors
129447858 (u2af2a)
Complex B
129447858 (u2af2a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Transformer
RRM_7
Motif
Other DBs
NCBI-GeneID:
129447858
NCBI-ProteinID:
XP_055065759
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All DBs
Position
8:complement(18707448..18714307)
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AA seq
469 aa
AA seq
DB search
MSDFDEFERQLTENKQADRDKENKHHRRSGSRSRSRDRDRKRRSRDRDRRGSRDRHGDSK
DRRHRRSRSPHREKKKIKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPEG
LAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGNPVLAV
QINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGK
TLYSGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYA
FCEYVDVNISDQAIAGLNGMQLGDKKLLVQRASVGSKNTTLTGINQTPVTLQVPGLMNSS
VNQMGGIPTEVLCLMNMVAPEELLDDEEYEEIVEDVKEECSKYGQVKSIEIPRPVDGLEV
PGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattttgacgagtttgagagacagctgaccgaaaacaagcaagcggatagagac
aaagagaacaaacaccaccggcgcagtggctcgagaagtcgcagcagagaccgggacaga
aagaggagaagtcgagaccgagataggagaggcagccgagatcgtcatggagatagcaag
gatcgcagacacagacgaagtcgctccccacatcgtgagaagaaaaagattaaagtgaag
aagtactgggatgttcctccccccggatttgaacacatcacacccatgcagtataaagcc
atgcaagctgctggtcagatcccagctactgctctgttgcccacaatgacccctgagggt
ctggctgtgaccccaacacctgttcctgtcgtcggcagccagatgactcgacaagcccgc
cgtttgtacgttggcaacatcccgtttggtatcacagaggagtctatgatggacttcttc
aacgctcagatgcgtttgggtggtttgacccaggcaccaggaaacccagttcttgctgtt
cagattaaccaggacaaaaactttgcctttctggagtttcgctcagtggatgaaacgaca
caggccatggcgtttgatggcatcattttccagggacagagtctgaagattcgccgacca
cacgactaccaacctctaccgggcatgagtgaaaaccccagtgtctatgtgccaggcaag
actctgtattctggtgttgtctctactgtggtgcccgattcggcacataagctcttcatt
ggcggtttgccaaattacctcaacgatgatcaggtgaaagaattgctgacatcatttggt
cccctgaaagcatttaacctggtgaaagacagcgctacaggcctctccaagggctatgct
ttttgtgaatatgttgacgtcaacatcagtgaccaggctattgcgggtctaaatggaatg
cagctgggtgacaagaaactcctggtccaaagagcaagtgtggggtccaagaacaccaca
ctgacgggaataaaccagactcctgtgaccctgcaagtgccaggtctcatgaacagttca
gtcaaccagatgggaggcattccaacagaggtcttgtgtcttatgaacatggtagctcca
gaggaactgcttgatgatgaagagtatgaggagatcgtggaagacgtcaaggaagagtgc
tccaaatacggccaggtcaagagcattgagatcccgcgtcctgtcgatggcttggaagtt
ccgggcactggaaagatctttgtggagtttatgtcagtgtttgactctcagaaagcaatg
caaggcttaacaggaaggaaatttgccaacagagtggtggtgactaaatactgcgaccct
gacgcctaccaccgccgcgacttctggtag
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