KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129447903
Entry
129447903         CDS       T09481                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:manu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:manu03400]
    129447903 (mdc1)
DNA repair and recombination proteins [BR:manu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    129447903 (mdc1)
SSDB
Motif
Pfam: BRCT_2 BRCT RTT107_BRCT_5 FHA PTCB-BRCT BRCT_3
Other DBs
NCBI-GeneID: 129447903
NCBI-ProteinID: XP_073728156
LinkDB
Position
10:complement(19338887..19348376)
AA seq 1925 aa
MDATQQIEDSFSEEEDEIEEKQEGPEKDQVATLKVFKNDHIPETEFPLYVGENILGRDPA
VCSVPLPARSVSSRHAVISISVFRSSNTRSNDIEAIEALLWDMGSLNGTRKGRIKLTPQV
RYALAEGDSVVLADVPCQYISLHVPNKHTNVGPKVKVASKHTKQRSPFLSSSDSEPKVRK
GGVNEKKRGTLPPVPLWSDEDEEPKNATGLCSTQPANKQPEITLVPDSDSGSDGESAIDE
RRDLVSDSASSSNLVSPSDSTFLSPARQIIPESEDESSITPSSAAKDRFKLKDSFSVDCS
DSSKTGPLALNLDSDTDIEEEETERSKTGAEAQIEIASKVQPVSSADLHMDSDTDVEEEE
MEKSKTHPEAMTDEVSKVESVISADLHMDSDTDVDEEDTEKSKTEPEAQTKETENLKSVT
SADLHMDSDTDVEEEETEKSKIEPEPPTKEAPKVDRVTSPDLNMDSDTDVEESDASNELP
KVLAVPESPPSAPPNAKIQLDSDTDVEDDNPMDVPMAAEVSRPVVMDGDIRPTANPGTEF
CMDSDTDVDEDDKDKKARDPLSNSETDDEDPFKSLPGKTVNVAANQKTTSNSEGSTVEQS
DKGTHKQINPIQTHTNYEEPTQAFDGPEDWDLQATQAYGVTGASAGLRPKQLDLEATQAY
GSEIDGEEEEKEPLSNNEMYSNLSTAETQLILPTKSNDEDDNDDEEMHEHSHLSTADTVI
IASTPRREEQTQNFALFSAPTQLMWEGEEKEVDQSEPAQVVEADTIDETQDGEEDDENVK
WGRRKPHVGRKMPKHKNISSSDIFIAETQPMCEDEVASDEGLNSAVSSKDTDHEHKHLKG
EPSSSNVAIEETQPMCEYEDASDEGLSSAVSSSDTDHERKHLRGEPSSSNVAIAETQPMS
EEEQTLNEDFKSGVNSVRPNLRQQAEEQKSNHLASKSSISHITIAETQPMCEDEDEPDEG
LSNAVSSVLTGQDEAMRLTEEPLTSHVTIAETQPMSDEEQTLNENLKSGVNSDTLDTNHQ
ADKHESTQLADNILGAKKQEAITETQPICEEEKAPKQLKKTQLVDEEDEGQDKDLKSKMP
SRRSRRGRPKKEEVAQAAEAVVFHTIPTTEPICEEEDEKDEEQNIELKSRRSRRGRPIKK
NGIPQPVVSLVTETQPVPEGKNEGEDLNGGIRSKRSRRGKEKDEPELKSDLNIVETQPVT
EENVQEEPANAGSSSQRRQPRGRRQMKEKTDQENEAGASTKGPGKARKGQEGKRKRGKAL
SEDEEESEEEKTRRGTRRTGLKQKCNKKEGEEELEENIERSAQEEKEKIEKELQEQEERE
RLEREENERLECERKEREEREAKERVEREQKELEEKERLEREEEERIRKEKEEHEAMERL
KREAEEKDRLERELKNKLERQQLEKEEEEIIQRVKEQKDKMEKENLQRLEAEREQLEKER
QENERLEMTAKAQLNKEQKKMNQHEKQKNETLKEKNAELNASPVSPNDDAPARRSRRHSN
SSMNSEQSVASQQEQPSPRGRGRGRGRGRGRGRGRPTANEQPISGRQTGRRKTIPGHADG
VEDTEPDSTPRSRSRSNSRSSERSSNSSRTPDQSARGRGRKSVKVPQPEEEVSQAKTPGK
GRGKGGRRTNVDNINVESSKHEQDAEVVEEAVKPQTNSRGRKRAATASTSSVEEAVKPQT
NSRGRKRAATASTSSVETPPPTPKTPRRSVASQMPKVLFTGLTDEDAERVVARLGGSLAK
GVNDMTHLVTDKARRTVKFLCAVARGVPIVTPDWLQKCGKAGSFLSADDHLLKDVEQEKK
FSFSLQASLQAALHQPLLNGYEIHVTKSVIPEPSQMKEIIACCGARFLPKMPSAHKEHTV
VVSCEQDRALCAKALSMSLPVVSTEFLLTGILQQKVDLQAYALTFTPNTTNQPTTPKTPS
RGRRK
NT seq 5778 nt   +upstreamnt  +downstreamnt
atggatgcaactcaacaaattgaggattcattctctgaagaagaagatgagatagaggag
aaacaggaaggacctgaaaaagaccaagtagcaacactgaaggtgtttaaaaatgatcac
attccagagacagaatttcctctctacgttggagagaacatcttgggtcgtgatcctgct
gtctgttctgttccgcttccggcccgatctgtgtctagtcggcacgctgtcatctccatc
tcagtgtttcgctctagtaacactcgttccaatgatattgaagccatagaggcactatta
tgggatatgggcagtttaaatggaaccagaaaaggaagaataaagctaacaccccaagtg
cgatacgcactggccgagggagacagtgtggtgctcgctgatgtaccgtgccagtatatc
agcctacatgtcccaaataaacataccaacgtaggtccaaaggtcaaagtagcctccaag
catacgaaacagagaagtccatttctgtccagcagtgactccgaaccaaaggtgagaaaa
ggaggggtgaatgagaaaaagagaggtaccttgcctcccgtgcctttatggagtgatgag
gatgaagaacccaagaatgcaaccggtctgtgttcaacacagccagccaacaagcagcct
gaaattaccctggtgcccgattctgactctggttctgatggagagagtgctatagatgag
aggagagatttggtttcagattctgcatcttcctccaatctggttagcccctcagattca
acattcctgtcccctgcaagacaaatcattccagagagtgaggatgagagctccatcact
ccatcttcagctgcaaaggaccgatttaaactgaaagatagcttcagtgtagactgttca
gactcatctaagactggcccgcttgctttaaacttggacagtgatactgatattgaggaa
gaggagacggaaagaagcaagacgggagcagaggctcagattgaaattgcttctaaggtg
caaccggtatcttcagcagatcttcatatggatagtgatactgatgtagaggaagaggag
atggagaaaagcaaaactcatccagaggctatgactgatgaagtttctaaggtggaatct
gtaatttcagcagatcttcatatggacagtgatactgacgtggatgaagaggatactgag
aaaagcaaaactgaaccagaggctcagactaaagagactgaaaatttgaaatcggtaact
tcagcagatcttcatatggacagtgatactgatgttgaggaagaggagactgagaaaagc
aagatagaaccagagcctccgactaaagaagctccaaaggtggaccgtgtaacttcacca
gatcttaatatggacagtgatactgatgttgaggagagtgatgctagtaatgaacttccc
aaagttttagcagttccggaaagtcctccatctgctcctcctaatgcgaaaatccagttg
gacagtgacactgatgtggaagatgacaatcccatggatgttcccatggcagcagaggtt
tcacgtccagtagtaatggacggtgacattagacctaccgcaaatcctggtactgagttc
tgcatggacagtgacacagatgtagatgaagatgataaagacaagaaggcaagagaccca
ctgtcaaacagtgaaaccgatgatgaggatccttttaagtctttaccaggcaaaactgta
aatgttgcagcgaatcagaagacgacttctaattcagaaggcagcacagtagaacaatca
gataagggaacccataaacaaataaatcctatccaaacacatactaattatgaggaaccc
acccaagcttttgacggtccagaagactgggacctacaggccacacaagcatacggtgtt
actggagccagtgctggtctcaggccaaagcaattggatcttgaggctacacaggcatac
ggatccgaaatagacggagaggaagaagagaaggagcctttgagcaataatgaaatgtac
tcaaacctttccacggctgaaactcagttgatcctaccaacaaagagtaatgatgaagat
gataatgatgatgaagagatgcatgaacactctcacctctccacagcagacactgtcatc
atcgccagcacccctagacgagaagagcaaactcagaattttgctctcttcagcgcccca
acacaacttatgtgggagggagaggagaaagaggtggatcagagtgagccagcccaggtg
gttgaggctgataccattgatgaaacacaagatggtgaagaggatgatgagaatgttaaa
tggggtagaaggaaaccccatgttggaagaaagatgccaaaacataaaaacatctccagc
tctgatatttttattgctgaaacgcagcctatgtgcgaggatgaggtggcatcagatgaa
ggtttgaacagtgctgtcagcagcaaagacacagatcatgaacacaaacatcttaaagga
gaaccctctagctccaatgtcgccattgaagaaacacaacctatgtgtgagtatgaagat
gcatcagatgaaggtctgagcagtgctgtcagcagcagtgatacagatcatgaacgcaaa
catcttagaggagaaccctctagctccaatgtcgccattgctgaaacacaacctatgtct
gaggaagagcaaacactgaatgaggattttaagagtggagtcaactctgtgagaccaaat
ttaagacaacaggcagaggaacagaaatccaatcacctcgcttctaaaagctccatctcc
catattaccattgctgaaacacagcctatgtgtgaggatgaagacgaaccagatgaaggt
ctcagcaatgcagtcagcagcgttcttacaggtcaagatgaagccatgcgtcttacagaa
gaacccttgacgtctcatgtcaccattgctgaaacacagcctatgagcgatgaagaacaa
acactaaatgagaatctgaagagtggggttaactctgatacactagatacaaatcatcag
gctgacaaacatgaatccacacagcttgctgataatattttgggagccaagaagcaagaa
gctatcactgaaacacagcctatatgtgaggaagagaaggctcctaaacaacttaagaaa
acacagcttgtggacgaggaagatgaaggacaggacaaagaccttaaaagcaagatgcct
agtagaagatcgcgcagaggaagaccaaaaaaagaggaggttgcacaggctgctgaggct
gttgtctttcacactattccaacaacagagccaatttgtgaagaagaagatgaaaaagac
gaagaacagaatattgaactaaaatccagaagatctcgcaggggaagaccaataaaaaag
aatggaattccacaacctgttgtgtctcttgtcacagaaacacagcctgttcctgaggga
aaaaatgagggggaagatctgaacggtggcatcagatccaaaagatcccgcagaggaaaa
gaaaaagatgaacctgaactaaagtctgatctcaacattgttgaaacacagcctgtgact
gaagaaaacgttcaagaggaacctgcaaacgcaggcagctcctctcagagaagacaacct
aggggtagaagacagatgaaagaaaagacggaccaggaaaatgaggcaggtgcatctact
aaaggcccaggaaaagctaggaaagggcaggaaggaaaaaggaagaggggaaaagcattg
tctgaggatgaggaagagagtgaagaggaaaaaacaaggaggggaacaagaaggactgga
ttgaaacaaaaatgtaataaaaaggaaggagaggaagaattggaggagaacatcgagagg
agcgcacaagaagagaaagagaagattgaaaaagagctgcaagaacaggaggagagagag
aggttggaaagagaagaaaatgaaagactggaatgtgaaagaaaagaaagggaagaacgc
gaagctaaagagagagtggaaagagagcagaaggaattagaagagaaagaacgattggaa
agagaagaagaggaacggatcaggaaagaaaaagaagaacatgaggcaatggagagatta
aagagagaggcagaggaaaaagatcgtttagagagagagttgaagaataaattggagagg
caacagcttgaaaaggaagaggaggaaataatacagagggtgaaggaacaaaaagacaag
atggaaaaagagaatttacaaagactagaggcggagagagaacagttagaaaaagagaga
caagaaaatgagaggcttgagatgacggcaaaagcacaactgaacaaggaacaaaaaaag
atgaaccaacatgaaaaacaaaagaatgagacattgaaggagaaaaatgcagaactgaat
gcttctccagtttctcccaatgatgatgcccctgccagacgatcacgccgccattcaaac
tcatctatgaactctgagcaatctgtagcatcacaacaggagcagcccagtccgagaggc
agagggaggggcagggggcggggcagggggcggggcagagggagaccgacagctaacgaa
caaccaattagtggcagacagactggcaggagaaaaaccatcccaggtcatgctgatggt
gttgaagacacggagccggattccacaccccgttctcgatctcgctccaattctagaagt
tcggaaagatcctccaatagctcgagaactccggaccaaagtgcaagaggaagaggcaga
aagagtgtgaaagtaccacaaccagaggaagaagtttcccaagctaaaaccccaggaaag
ggcagggggaaaggaggcaggcgtactaatgtagacaacataaatgttgagagcagtaaa
catgaacaagatgcagaggtagtagaagaggcagttaaaccccaaaccaacagcaggggg
cgcaagagagcagccactgccagcacatcctcagtagaagaggcagttaaaccccaaacc
aacagcagggggcgcaagagagcagccactgccagcacatcctcggtagagactcctcca
cccacacctaagacaccgcggcgatctgtagccagtcaaatgcccaaggtattatttact
gggctgacagatgaggatgcagaacgagttgtagcccggttgggtgggagtctggcaaag
ggggtgaatgatatgactcacctggtgacggataaggctagacgcactgttaaatttctc
tgtgctgttgccagaggagtgcctattgtgactcccgattggctccaaaagtgtggcaaa
gctggcagtttcctttctgctgatgatcatttattaaaggatgttgagcaggaaaagaag
tttagtttcagcctacaggcatcgctacaagcggctctacatcagcctctcttaaatggt
tatgagattcacgtgacaaaatcagtgataccagaaccatctcagatgaaagaaatcatt
gcctgttgtggagcacgttttcttcccaaaatgccctctgctcacaaggaacacacagtg
gtggtgtcatgtgagcaggacagggcactttgtgcgaaggcattgagtatgtcattgcct
gtggtcagcacagagtttctattgactggcattctgcagcagaaagtggacctgcaggcc
tatgctctcactttcactcccaacacaactaatcagcccacaacccccaaaacaccatcc
agggggcgtaggaagtag

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