KEGG T09481: 129448034

Misgurnus anguillicaudatus (oriental weatherfish): 129448034

Entry

129448034         CDS       T09481

Symbol

ddx61

Name

(RefSeq) probable ATP-dependent RNA helicase ddx6

K12614

ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]

Organism

manu Misgurnus anguillicaudatus (oriental weatherfish)

Pathway

manu03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:manu00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129448034 (ddx61)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:manu03019]
    129448034 (ddx61)
   03036 Chromosome and associated proteins [BR:manu03036]
    129448034 (ddx61)
Enzymes [BR:manu01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     129448034 (ddx61)
Messenger RNA biogenesis [BR:manu03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129448034 (ddx61)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     129448034 (ddx61)
Chromosome and associated proteins [BR:manu03036]
Eukaryotic type
  Gene silencing
   piRNA pathway
    129448034 (ddx61)

SSDB

Motif

Pfam:

DEAD Helicase_C ResIII CMS1 NA-iREase2

Other DBs

NCBI-GeneID:

129448034

NCBI-ProteinID:

XP_073728222

LinkDB

Position

10:complement(22523660..22554127)

AA seq 483 aa
MATARTEIPAPLMAMTKQNGQSKAMSLQSGSHTSSTQSGKTPVVPQKGSSIPQSSGGIRF
GDDWKKCLQLPPKDTRVRTTDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIP
IALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDYVQAMVLVPTRELALQMSQICINMS
KHLGGVKVMATTGGTNLRDDIMRLDEIVHVIIATPGRILDLIKKGVAKVDRAQMIVMDEA
DKLLSQDFVVLIEDIISFLPKNRQVLLYSATFPISVQKFMSKHLQKPYEINLMDELTLKG
ITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKM
MQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRY
GHLGLAINLITSEDRFNLKGIEDQLMTDIKPIPSSIDKSLYVAEFHSLNPDEEEAAQKAA
ELI

NT seq 1452 nt +upstreamnt +downstreamnt
atggctacagcaagaacagagatccctgctccactcatggcaatgaccaaacaaaatgga
cagtctaaggccatgtccctccaatcaggatcacatacttcctcaacacaatcaggaaaa
acacctgttgtgccccagaaaggaagcagtataccccaaagcagtggtgggatcaggttt
ggagatgactggaagaagtgcctgcagcttccaccgaaagacacgagagtgagaaccaca
gatgtaactgcaaccaaggggaatgagtttgaagattactgccttaaacgggaactgcta
atgggtatttttgagatgggctgggagaagccatcccctatccaggaggagagcattccc
attgccttgtcaggtagggacattctcgcccgagctaaaaatggcacagggaaaagcgga
gcctacctcatccccctcttggagaggattgatctgaagaaggactacgttcaagccatg
gtgttggtgccaactcgtgagctggcactgcagatgagccagatatgtatcaacatgagc
aagcaccttggtggcgtcaaggttatggctacaacaggtggcactaacctgagggatgac
atcatgcgtcttgatgagattgttcatgttataatagctaccccaggcaggatccttgac
ctgataaagaaaggtgttgccaaagttgacagagctcagatgattgtgatggatgaggct
gacaagttgctttcccaagactttgtggtgctcattgaggacatcatcagcttccttccc
aaaaaccgtcaagttcttctctattctgccacttttcctattagtgtgcagaagttcatg
agcaagcatcttcaaaagccatatgaaatcaatcttatggatgagctgacactgaaaggc
atcactcaatactatgcctatgttacagaaagacaaaaagtacactgtctcaacaccctt
ttctccaggctccaaatcaaccaatcaatcatcttctgtaactccacccaaagggtggaa
ctccttgccaagaagattacacagcttggttattcctgcttttacatccatgccaagatg
atgcaggaatacagaaaccgggtgttccatgacttcagaaacgggctgtgtaggaacctg
gtctgcacagatcttttcacaagaggaattgacatccaggctgtcaatgtagttatcaac
tttgacttccccaaaaatgcggaaacgtacttgcaccgcattggcagatcaggcaggtat
ggtcacctgggtctggccattaacctgatcacctccgaagatcgtttcaacctgaagggc
attgaggaccagctgatgactgacattaagcccattcccagcagcattgacaagagcctg
tatgtggcagaattccactcccttaaccctgacgaggaggaggctgcccaaaaagcagca
gagctgatttaa

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