Misgurnus anguillicaudatus (oriental weatherfish): 129448061
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Entry
129448061 CDS
T09481
Symbol
rad54b
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129448061 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129448061 (rad54b)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
129448061 (rad54b)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
129448061
NCBI-ProteinID:
XP_055066088
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All DBs
Position
8:23488952..23505833
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AA seq
901 aa
AA seq
DB search
MRRSGAPSQLSGNDAKKPRFMPPLSRVESRSSLPSPTPTPTLGNVLLSKVQMCLSSGDAS
AVSKAPASSKALARVLSALPQGECKENNLRSSSSDFSEAEQSTDKDSCSVQSSTHANSTS
TVHYYSVMWCKASSRKHKRWEGDAVLIAKGRSVVLKDMEGRDIGRGSGYKASELESLSEG
QTLNVGGKQIEVMGVISDEDYVKGRCFQDATVETSAEAIVKAPVYRPLAKSFTRPGLKGA
LQDFTPEGAPCKPKHDPNAPGALVMPRPTTDHQWLNNKSGSPLVDVVVDPHLTNHLRPHQ
KEGVVFLYECLMGMRLAGRCGAILADEMGLGKTLQCVCVLWTLLRQGPYGGRPIIKRALV
VCPGSLVKNWAAEFNKWLGRERISVYTVDQDHRVEEFASSPIYTVMVISYEMLLRSVDKL
KELDFGVLVCDEGHRLKNSNIKTSGALTALSCQRRLILTGTPVQNDLQEFYSIVEFVNPG
ILGTSAAYRKIYEEPILRSRQPSCTEEERFIGEERAAELFRLTGVFTLRRTQEIINQYLS
ERIEWTVFCKPTELQLRLYGVLLATRPIKACLSSAGTHSYTHSPHLACINALKKLCNHPG
LLYNTLQEKTNEMFEDEMMELFPEGYSAGAFSTADSGKLLVLTDLLSAIQDVNCKDRVVL
VSNYTQTLDLLQNVCDHIGYKWCRLDGQTPVAQRQRIVDSFNSPHSSNFLLLLSSKAGGV
GLNLIGASHLVLYDLDWNPANDIQAMARVWRDGQKKTVHIYRLLTTGSIEEKIYQRQVSK
QGLSGTVVDMTKKAEHISFSAEELRDLFTFEPNTTCLTHDLLGCQCAGDGNTPGVVNEVN
EETGRACQLGRHVNSTAAFPQRVSMSELMQWRHFAGTVQSYDDIYLNRACSHVTYAFQST
T
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggtctggagctccgagtcagctcagcggcaatgatgcaaagaaaccccggttt
atgcctcccttatcaagggttgaatcaagatcatcactaccatcacctacaccgacgcct
acattaggaaatgtgctgcttagtaaggtccagatgtgtttgagtagtggagatgcttca
gctgtgtctaaagctccagcaagcagtaaggctttagccagagtcttgagtgctcttcct
cagggggaatgtaaggaaaacaacttaagatcatcatcatctgacttttctgaagcagag
caatcaacagacaaagacagctgctcggtgcagtcaagcactcatgccaactctacgtct
accgtgcactactatagtgttatgtggtgcaaggcatcatcaaggaagcataagcgctgg
gagggcgacgctgtgctgattgcaaaggggcggagtgttgtcctcaaagacatggaggga
cgggacattggacgaggatcaggctataaagcctctgagctggaaagtctgtctgagggt
cagactcttaatgtgggaggaaaacaaatcgaggtaatgggagtcatttccgatgaagac
tacgtcaagggccgttgtttccaagatgccactgtcgagacgtctgcagaggcaattgta
aaggctcctgtatatcgaccactggccaaatcctttacaaggcccggacttaaaggagcg
ctacaagatttcacccctgaaggagccccatgtaaacccaaacatgacccgaatgcacca
ggagctcttgtgatgccacggccaaccactgatcaccagtggctaaataataaatctggt
tctccactggtggatgtggtcgtggaccctcacctgaccaatcatcttcggccacatcag
aaagagggcgtggtctttctttatgaatgcttaatgggaatgagattggctggccgctgt
ggggcaattttagcagatgagatggggcttgggaagaccctacagtgtgtttgtgtgctg
tggacactactgagacagggtccctacggtgggcggcctataattaagagagcgcttgtg
gtgtgtccaggtagtttggtgaagaactgggctgctgagtttaataagtggctggggaga
gagaggatcagtgtttacaccgtggaccaggatcaccgtgtggaggagtttgcttcttct
ccaatttacactgtgatggtgatcagttatgagatgttgctgcgctctgtggacaaattg
aaagagctggattttggagtgctagtctgcgatgaaggacatcgactcaaaaacagcaat
attaaaacatctggtgccctcactgctctttcatgtcagaggcgccttatattaacaggc
actcctgtgcagaacgatctgcaggagttttattccattgtcgagtttgtaaatccagga
attctgggaacatctgcggcctacagaaagatttatgaagaacccattctcagatctcga
cagccctcgtgcacagaggaggagagatttattggagaggagcgtgccgctgagctcttc
cgtctaacaggggtgtttacgctgcgacgcacgcaggagattatcaatcagtatttgtca
gagcggatcgagtggactgtattttgcaaacccaccgaactgcagctgcgtctgtatgga
gtcctgctggccacacgtcccatcaaagcctgcctttccagtgccggcacacactcttac
acacacagcccacaccttgcatgcatcaacgctcttaagaagctttgcaatcaccccggg
ctgctgtataacactctacaggaaaagacgaatgagatgttcgaggatgaaatgatggag
ctttttcctgaaggctactccgcgggtgcttttagcactgcagattctgggaagcttcta
gtgctaacagaccttctgtctgcaatccaggatgtcaattgcaaagacagggttgttttg
gtgtctaactacacacaaactcttgacttgctgcaaaatgtctgtgatcacattggctac
aaatggtgtcggctcgatggacagacgcctgttgcccagcgacaacgaattgttgattct
tttaacagtccacattcttccaacttcctgttgcttctcagctctaaggctggaggggtg
gggcttaacctcattggtgcctcccatcttgttttatatgatttagactggaatccagcc
aatgacatacaggccatggcacgagtatggcgagacggacagaagaaaacagttcacatc
tacaggctacttacaacaggttctatagaagagaagatctatcagagacaggtgagtaaa
caggggctttctggtacagtggtcgacatgaccaaaaaggctgagcatattagcttttct
gccgaagagctgcgggacctttttacttttgagccaaataccacctgtctcactcatgac
ctgctgggctgccagtgtgccggtgatggaaacacaccaggtgttgtgaatgaggtaaat
gaggagactggaagggcatgccaactcggtcgccatgttaatagcacagcagcgtttcca
caacgtgtcagcatgtctgagcttatgcaatggaggcatttcgctggaaccgtccaatca
tacgatgacatttacttaaatcgggcttgtagccatgttacgtatgcctttcagagcacc
acttaa
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