Misgurnus anguillicaudatus (oriental weatherfish): 129448227
Help
Entry
129448227 CDS
T09481
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129448227 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129448227 (cnot3a)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129448227 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129448227 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
129448227
NCBI-ProteinID:
XP_055066408
LinkDB
All DBs
Position
8:complement(26983582..26995063)
Genome browser
AA seq
899 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEETEQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRYHI
RMLETILRMLDNDSIQVDSIHKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEEIPTTLMA
TSPQGHNEDEMFLQSSSTPTSTTSSSPIPPSPATGITEILEDKRARSIDGEVSQSPVKNG
NPSLSSFSSSASSGSSSSSSSLVSMATVVGSCTAVSGASSLLGSFSNAVQQHPPQSQPQA
QVKLSSTSSTTSNNTPSPPSHPTLPTSTSSSLPSPSTPGPVTSNSQSSSAGLGGSSHGLG
MGLGKGVTVTSSSSVGQMQSLGMTGMPSSLSTMAGLLSGSTPAPYAQAAAGGTASSASSG
PVGNSSSSTGISITSGSTGGASTGATSNGTGTGVGLGLLGSSSGHGALSAGILNLVPGQT
SLQGSAQVPISPVGTAPGGGISEGGLGGNGSSTVGSGGVGTSIAPARPPSSLKQNGATSY
SAVVADNTTDISLSSASQSQNSHSSSSSSSSNQNLDNGPSLLSSITLPPSSPSPAFTDST
PGGGSLLNGPHSYTPNTEAIKAPEPPSSLKAMAERAALGLTLDGEIPSLHLTDRDLFSGS
SAPPGPTTAPQPAVSEVNLPPSLGACPLGPTPLTKEQLYQQAMQESAWTHMPHPSDSERI
RQYLMRNPCPTPPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQ
SWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagaaaacttcaaggagaaatagatcgatgtttgaaaaaagtcgctgaa
ggtgtagaacagtttgaagacatttggaaaaagcttcacaatgcagcaaatgccaatcag
aaagaaaagtatgaggcagatctcaagaaagagattaaaaagctccagcggctacgagac
cagattaaaacatgggtggcatccaatgaaatcaaagacaaacggcagctagtggaaaac
cgcaagcttattgaaacgcaaatggagcgattcaaggtggttgaaagagaaaccaagaca
aaggcctattcgaaagaggggctgggattggctcagaaagtggacccggcacagaaagag
aaggaggaaacggaacagtggctcacgaatacaatagacactttgaacatgcaggtggac
cagtttgaaagtgaagtcgaatccctctctgttcaaactcgaaagaaaaaaggagacaaa
gagaagcaggatcggattgaggagctgaagaggttgattgaaaggcacaggtaccacatt
agaatgctggagaccatcttgaggatgttggacaatgattcgattcaggtggactctatt
cataagatcaaagatgacgttgagtactacattgactcttcacaagacccagactttgag
gagaacgagtttctctacgatgacttggacttggaggagataccaactaccttgatggca
acgtctcctcagggccataatgaagatgagatgttccttcagtccagcagcaccccaacc
tcaaccacctcctcttcacccatccctccatctcctgctacaggaataacggagattttg
gaagataaaagagctcgatcgatagacggtgaagtgagtcagtctcctgtgaagaacggc
aacccatctctctcatcgttctcctcatccgcctcctcaggctcctcctcctcctcttct
tctctggtctccatggctactgttgtcgggagctgcacagcggtctctggggccagcagc
ctactgggaagcttcagcaatgcagtacagcagcatcctcctcagtcccaaccgcaagca
caggtcaaactctcctcgacatcatctacaacctccaacaacacgcctagcccacccagc
caccccacactacccacatccacttcttcctctctgcccagtcccagcacacctgggccg
gttacttccaactcccagtcgtcttcagcagggcttgggggctccagtcatggactgggg
atgggtttggggaaaggtgtcacagtgaccagcagcagtagtgtgggtcaaatgcaaagt
ttgggcatgacaggaatgcctagttctctcagcaccatggcagggcttctctcaggctct
acccctgccccctatgcccaggcggctgcaggtggaacagcaagtagtgcctccagtggt
ccagtggggaatagcagcagtagcactggcatatcaataacaagcggaagcacaggagga
gcgagcacaggtgcaacaagtaacggtacgggaacgggtgtaggtttgggcctgttaggg
tccagttctggccacggtgctttaagcgcaggaattctgaaccttgtaccagggcagaca
tctcttcaggggtctgcgcaagtaccaataagccctgtgggcacagcacctgggggagga
atcagcgagggtggattgggtggaaatgggagcagcacggtgggaagtggaggagtgggg
acgagcatagcacctgcacgaccccccagcagcctcaaacaaaatggagcaaccagttac
agtgctgtggttgcagacaacacaacagacatctccctcagcagtgccagccaatcacaa
aacagccattcctcttcctcaagctcgtcatcaaatcaaaatctggataatggtcccagt
ttattgagttcaatcactctacccccctcctccccatcacctgctttcactgacagcaca
cctggtggtgggagtctactaaatggcccacactcctacacacccaacacagaagccatc
aaggctcctgaaccaccaagctctctgaaagcgatggcagaaagagcagcactaggattg
acactagatggagaaatcccatcattacacttgacagatcgagatctgttctcagggtct
tcagccccacctggtcccacaacagcacctcagcctgctgtttcagaagtcaacctccca
ccatctttaggggcatgtccattaggacccacgcccttaacaaaagagcagctctaccaa
caggccatgcaggagtcggcatggacacacatgccccacccatcagattcagagagaatc
aggcaataccttatgaggaatccctgccctacacccccattccaccaccaggtgccccca
catcattcggactctattgagttctaccagagattgtccactgaaactctcttcttcatt
ttctactaccttgagggcacaaaggcacagtacctgtcagctaaagcactgaagaagcaa
tcgtggaggttccacacaaaatacatgatgtggttccagaggcatgaggaacccaaaacc
atcactgatgagtttgaacagggcacgtacatttactttgactatgaaaagtggggccag
agaaaaaaggaaggatttactttcgagtacagatacttggaggacagagatctacagtga
DBGET
integrated database retrieval system
