Misgurnus anguillicaudatus (oriental weatherfish): 129448279
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Entry
129448279 CDS
T09481
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129448279 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
manu03310
]
129448279 (rorc)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129448279 (rorc)
Nuclear receptors [BR:
manu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129448279 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
129448279
NCBI-ProteinID:
XP_073728017
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Position
10:complement(14023380..14055569)
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AA seq
508 aa
AA seq
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MENDEPESPDLSPANTQGRRGTPGPKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDS
LIAEVERHRQQQRLQANSIQEPQSLPAYRAGKEPREQSSHLIPPLSSPYPYSPIEPDLSG
CPVEVHPYLGCHVPESQAVGLAYRVTHRRGESNNLSTGRGVDSTRSTPEAILNMPGSEMG
FRPFDPESSFFSYPTSLHVEELCASILRSHRETTQYRPEELQGLRWKVFSREETHAYQSK
SVDEMWQHCAVRLTDAVQYVVEFAKRIPGFRQLCQNDQIALLKSGSMEVVLVRMSRMFNT
ENNTVFFDGKFAGTELFKSLACSDLIANVFDFAHNLCMLRLTEQQMAVFSALVLLNADRP
CLENRERVQRARRDVELALSHILHRDNQETLLHKLYQRMPLLKSLCSLHIEKLRWFRQLY
PLTVHSLFPPLYKELFGSDTDIQTLATH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgacgaacccgaatcaccggacctgagccctgccaacacacagggtagacga
ggaactccagggcctaagaaatcccatttgactcagatagaagtgatcccatgtaagatc
tgtggagataagtcatcaggtgttcattatggagttattacctgtgaaggttgcaagggg
ttcttccgcagaagtcaatcctctagtgtgcagtactcgtgctccaggcagagtaactgc
cccatcgaccgcgccagtcgaaaccgctgccagagctgccgactcaagaaatgtgtcgct
cagggcatgagccgtgatgctgtgaagtttggccgcatgtccaagcgtcagcgagattca
ctcattgcagaagttgagagacaccgacagcagcagcgtcttcaggctaactccatccaa
gaaccgcagtctcttccggcctaccgggccggcaaagagcccagagaacagtcgtcccat
ctcatcccccctctctcctcaccctacccctattcccctattgagcccgacctgtcaggt
tgcccagtagaggtccatccttatctggggtgccacgtacccgagtcccaggctgtaggt
ctggcctatagagtcacccacaggaggggtgaaagcaataacctgtcaactgggagaggg
gttgactccacaagatctacaccagaagccatcttaaacatgccaggcagtgaaatgggg
tttcgaccttttgacccagagagctcatttttttcctacccgacctctctgcacgtagag
gagctatgtgcaagtattttacgttcccacagagagacgactcagtatcgtccagaggag
ctgcagggtctcagatggaaggtttttagcagggaggagacccatgcctaccagagcaag
tcagtggatgagatgtggcagcattgtgcagtacggttgaccgatgccgttcagtacgtg
gtggagtttgcaaagcgtatcccaggattccgtcagctctgtcagaatgatcaaatcgct
ctgcttaaaagtggatctatggaggtggttttggtccggatgagtcggatgtttaacaca
gaaaacaacacagtattttttgatggcaaatttgctggaacagaacttttcaagtctctt
gcatgcagtgatctaatagcgaacgtgttcgattttgctcacaatctgtgtatgctgaga
ctgacagaacagcagatggcagtgttttctgctctcgtcctcctcaacgcagatcggccg
tgtctggaaaacagagagagagttcagagagcacggagagatgtggagcttgctcttagt
cacattctgcatagagacaatcaggaaactctgctgcataagctgtaccagaggatgccg
ctgctgaagtctctgtgctcgctgcatattgagaaactgcgatggtttcgtcaactgtac
ccgctcactgtacattcgctctttcctccgctatacaaagagctgttcggctccgacaca
gacatccagacactggctactcactga
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