Misgurnus anguillicaudatus (oriental weatherfish): 129448291
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Entry
129448291 CDS
T09481
Symbol
arid1aa
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129448291 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129448291 (arid1aa)
03021 Transcription machinery [BR:
manu03021
]
129448291 (arid1aa)
03036 Chromosome and associated proteins [BR:
manu03036
]
129448291 (arid1aa)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Helix-turn-helix
ARID
129448291 (arid1aa)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129448291 (arid1aa)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129448291 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
129448291
NCBI-ProteinID:
XP_055066514
LinkDB
All DBs
Position
10:27852776..27875979
Genome browser
AA seq
2262 aa
AA seq
DB search
MAAQVASATSLNTSPPSELKKPDRDPKEESVPGEKQQENKEPGLESGSPGRGELQDRADV
GNAGGGGESEMKNGNGNPSRVNNNQNDTTGPEGNNHPGMVHHHAPGFPPPSYGYSQQYGR
AFHQHGGQQSPGMAAAAGPGALSSNMMDPYQPNSHEHGFPNHQFNNYSPYGNRSPYPGQG
YGMNSPRSAPQAQAVGGQSAKQQQPAAGGSMAASYNNQRYNMGNPQPTSTPTLNQLLTSP
SGARGYPNYTPSEYNSQDGAKGPADMGSSGQYGGGHPGWQQRTHHPPPMSPGSTGQAMGR
NQTPGSMDQMGKMRAQPYGSGGPYSQQPHQGPPPGPQQGPPYPGQGYGPAGPQRYPIGMQ
GRMQYSQQMPSYGQQGPGAYGQQGQQPYYGQHGQGPLSGQQQSPYPQPSAGQPGGQGPYS
QQPHTPQPSGPHGQAGAPYQHPHMPQQPQAQIPGQAQSTYSQTSATPQSAQSPYPQQQVP
QSQPPQQGNSQAPPASQTQPSYPPGQGSQQPSSQQPPQTSTPASQQPAGHGQMSQAQPTT
YSQNPPQQQQQQQQQSPFQRFPPPPQEISQESFSSQSSAPPSTQPLASKGSTEDIQGRPS
SLPDLSGSIDDLPTGTEGTLSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPPVGSPASRSG
PLSPATMPGNQMPPRPSSGQSDGIMHPSMNMPGMAQDRAYIQRNPQMAPYGSPQSGSALS
PRQSSGGQVHAGMVPFQQNNSMGNYGPQGGQYGPQGFPRQPGYSGMPNASYSGPGMGGAM
NPMSGQGGGPMYPGMPSARMPHGQMGARPYGPNMGPNMSPNVGPNMGNMPPQVGSGMCPP
PGLNRKPQDAAAMQHGPANSIHNRLPGYPNMSPGPGMMGSGPPYGPSMNNMPGMMNTQGP
SFPMGGNMANNTSGMSPGPDFGMDGKLSQTQKINNKAEGTPKTESKSKKSNSSTTTNEKI
TRLYELGPEPERKMWVDRYLAFIEEKALGMSNLPAVGRKPLDLFRLYMCVKEIGGLTQVN
KNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIISGETKKNQAK
IQPPSPAGSGSLQGPQTPQSTSSSMAESGDLKPPTPASTPHSQMPPMQSGRSSVNLQDPF
ADDPAFSRRNTMTPNSGYQSGMSTPEMPGRMGPYEPSKDHFSGMRKVGEQFIPGGQGPNS
GLGDQFNRGPPGPMGNMPMGQRHQYPYGPGYDRRPESGIGPEASMGPGVPQPNILPANAE
SGMYSPNRYPPQQQRHEPYANQYPGQGAPPGGSYPNQQPGMYPQQQSNYKRPGDGAYPPA
KRHHDGEMFSGPYNAQQPPSQAPPSGPSTGQQEMFNQYNSSYPGSEHRPPGPQNQYPFPF
GRDRMQPGTGPNSQGSMPPQMMGSPMQSGPDGPQGGMWQGRGDMGYGSYPNRQGPPTGPG
QGPAYHSMNRSEEMMSSEPRMNHDGQWPGPRQPPYGPGGAGPPMTRPLQSNYQSPQTMQN
HIPQVSSPTPMPRPMESRTSPSKSPYMPPNIKMQKAGPPVPASHIVPPPVQPPLMRRDLP
FPPGSLEATQPVLKSRRRLTMKEIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNS
ISNFNLIQLPGFLELIVEYFRRCLIEIFGILKEYEVGDPGQRALLDPSVLKKDENTVDDE
TLIEGMEEDGQMGEEEEGEEIQRSKPEEQHIAQEPLQIKQEDKLMTCEESVKKEDGQAID
GEPNTSDPPSLEVAVAQERPKQASKFDKLPLKVVRKNDPFVVDCSNKLGRLQEFDSGLLH
WSIGGGDTTEHIQTHFESKMDLSQLRKRFLPVQASDKKKGVPKDSQAPSPSSSEEHRKEV
DRQPSEQSTTEKVTNGISDTIDERPADCLESEGKSNVEKDQEKQGSETTTPENIRPAPSS
PSLLGQRTIAILEDEPHSKDEAPLVTLSDWQDSLSRRCMCVSNIVRSLSFVPGNDLEMSK
HPGLLLLLGRLLLLHHRHPERKQAPLTYEKEEEVDESVGKKKDEWWWDCLELLRENCLVT
LANISGQLDFSVYTESICLPLLDGLLHWAVCPSAEAQDPFPSLGLNGSLSPQRLVLETLC
KLSIQDNNVDLILATAPFSRLEKLFGNLVRLVGERKVPVCREMAVVLLANLAQGDSMAAR
AIAVQKGSVGNLLGFLEDSLAATQFQQSQGSLMHMQGTHFEPTSVDMMRRAARALLAFAK
VEENHSEFTLYESRLLDLSVSPLMNSMVSHVICDVLFLIGQS
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgctacctctctcaacaccagtccgccttccgaactaaaa
aaaccggatcgagacccaaaggaggagtcggtaccgggggagaagcagcaggaaaataag
gagccgggattagaaagcggatcaccgggtcgcggggaactgcaggaccgggccgatgtt
ggaaatgctgggggaggaggggagtctgagatgaagaacgggaacgggaatccgtcgagg
gtgaacaataatcaaaatgataccaccggacctgaaggaaataaccaccccggtatggta
catcaccatgcacccgggtttccgccaccttcctatggctacagtcagcagtacggccgg
gcttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggccaggc
gcgctgtcgagcaacatgatggacccgtatcagcccaactctcatgaacacggcttccct
aaccaccagttcaacaactacagtccgtacgggaaccgaagcccgtacccggggcagggc
tacggcatgaactctccgcgcagcgctcctcaagctcaggcggtaggggggcagtcagcc
aagcaacagcagccagcagcgggaggatctatggctgcatcttacaataatcagaggtat
aacatgggaaatccacagccaacatctaccccgaccctcaaccaactcctgacctccccg
agtggtgccaggggctacccaaactacacaccgagcgaatacaacagccaggatggtgct
aagggaccagcagatatgggcagcagtgggcagtacggtgggggccatccgggttggcaa
caaaggacccatcacccgccgcccatgagtcctggaagtaccgggcaggctatgggtaga
aaccagactccaggctctatggatcagatggggaaaatgcgagctcagccatatgggtca
ggtggtccttattcacagcagccccatcagggaccacctccagggccccagcagggtcct
ccttacccaggccagggttatgggcccgctggccctcaaagataccctataggcatgcag
gggcgtatgcagtacagccaacagatgccatcgtatggacaacagggaccaggggcctat
gggcagcaggggcaacagccgtattatggccagcatggccagggtcctctctcaggccag
cagcagtcaccatatccccagccttctgctggccaaccaggaggtcaaggaccttattca
cagcaacctcacaccccccaaccatctggtccacacggacaggccggtgccccgtaccag
catccccacatgccccagcagccccaggcgcaaatacccggccaggcccagtccacgtac
tcgcagacctctgcgacaccccagtctgctcagtccccctatccacagcaacaggtgcct
cagtctcagcctccacagcaggggaactcgcaggcccctcctgcatcccagacccagccc
agctacccacccggccaaggctcccagcagccatcatcacagcagccaccgcagacgtcc
acacctgcatctcagcagcccgctggacacggacagatgtcgcaggcacagcccacgacg
tactcccaaaatcccccacaacaacaacaacagcagcagcagcaatcgccatttcagcgt
tttcctcctcctcctcaggagatttcccaagagtcttttagctcccagtccagtgcacct
ccctccactcagcctctggcatcaaagggaagtacagaggacatccagggcagaccctca
agtctaccagatctctctggctctattgatgacctgcctactggtacagagggcactttg
agccctggagtcagcacatctggggtatccagcagtcaaggagaacagagtaatcctgca
cagtcacccttctccccccacacgtctcccccagtgggctcgcctgcatctcgctctggc
cctttgtcccctgccacaatgccagggaaccagatgcctccccgtccttcaagtggacag
tctgacgggatcatgcacccttcgatgaacatgcctggcatggcccaagacagagcatat
attcagagaaaccctcagatggcaccctacggttctccacaatctggatctgctttgtcg
cctcgtcagtcttctggaggccaggtgcatgctgggatggttccttttcagcaaaacaac
tctatgggcaactacgggcctcagggtggtcagtatgggccgcaaggtttccctaggcaa
cctggttacagtggcatgcctaatgccagttactcaggtcctggcatgggtggagccatg
aaccctatgtctggacaaggaggagggccaatgtatcctggcatgccttctgctaggatg
cctcatggccagatgggtgcacgtccttatggcccgaacatgggtcccaacatgagtccc
aatgtgggccctaatatgggcaacatgccgcctcaagtaggatcggggatgtgcccaccc
ccaggccttaacagaaagccacaggacgctgcagcaatgcagcacggaccagcaaactcc
atacacaacagactaccgggataccccaatatgtctcctggtccgggtatgatgggttca
ggtcctccatatggaccgtccatgaacaacatgccagggatgatgaacacccagggtcct
tccttccccatgggtggtaacatggccaacaatactagtggcatgtctcctggtccggat
tttgggatggatggaaaactaagccagacacaaaaaataaataataaagctgaggggaca
cctaagacagaatcaaaatccaagaagtcaaattcctccacgacaaccaatgagaagatc
actcgattgtatgagcttggcccagagccagaaagaaagatgtgggtggaccgttacctg
gctttcattgaggagaaagctttgggcatgagtaacctaccagctgtgggacgcaagccc
cttgatctcttccgcctctacatgtgcgtcaaggagattggaggtcttacacaggtaaat
aagaacaaaaaatggagggagctggccacaaatctgaatgtagggacctccagcagtgca
gccagctctctgaaaaagcagtacatccagtgtctatatgcttttgaatgtaagattgag
cgtggagaggacccaccacctgacattatttctggagagaccaaaaagaaccaggccaaa
attcagcctccctccccagctggttctggctctctccaggggccgcagactccgcagtcc
accagtagctccatggcggaaagcggagacctaaagcctcccactcctgcctctacccca
cacagccaaatgcccccaatgcaaagtggcaggagcagtgtgaacctgcaggatcctttt
gctgatgacccagccttttctcggagaaacactatgacacccaactccggctaccagtcg
ggcatgagcactccagagatgcctggtcgaatgggaccctacgaacccagtaaagaccac
ttcagtggcatgcgtaaagttggagagcagtttatacctggtggacagggacccaacagc
ggtctcggtgatcagttcaacaggggaccaccaggccctatgggaaacatgcctatgggt
cagaggcaccagtatccatatggtcctggttatgacagaaggccagagtcagggataggc
ccagaagccagcatggggcctggagtgccacagccaaacattctgcctgctaatgctgaa
tctgggatgtattcaccaaatcgataccctccacagcaacagcggcatgaaccgtatgct
aatcagtatcctgggcagggtgcgcctcctggtggctcttatccgaatcagcagcctgga
atgtacccacagcaacaatcgaactacaaaaggccaggtgatggagcctacccaccagct
aaacggcatcatgatggtgagatgttcagtggaccatacaatgcacaacagccaccgtca
caggctccccctagtggtccctcaactggtcagcaagagatgtttaaccaatataacagt
tcttatcctggctcagagcaccgtccacctggtcctcagaatcagtaccctttccccttt
ggaagggatcggatgcaaccagggacaggccctaactcccagggttccatgccgcctcaa
atgatgggcagtccaatgcagtccggccctgatggtcctcaaggtggcatgtggcagggc
cgaggtgatatgggctatggtagttaccccaaccgtcagggacctcctaccggtcccgga
cagggccctgcataccattcaatgaaccgatctgaagagatgatgtcatccgagccacgc
atgaatcacgatgggcagtggcctggcccacgacagcccccgtatggccctggtggtgca
ggcccaccaatgactagacctttgcagtccaactaccagtctccccaaaccatgcagaac
cacattccacaggtgtcaagccccactcccatgccccggcccatggaaagcaggacttcg
cccagcaaatcaccctacatgcctcccaatatcaaaatgcaaaaggctggacctccagtc
cctgcatctcacattgtacctcccccagtacagcctccactaatgagaagagacctgccc
ttccctccaggctccctagaggccacacaacccgttctcaaatcacgcagacgtcttacc
atgaaagagattggcactccagaagcatggagagtcatgatgtccctaaaatcaggactg
ttggctgagagcacatgggctttagataccatcaacatcctgttgtatgatgacaacagt
atttcaaatttcaaccttattcagctcccgggtttcctggaactaattgtagagtatttc
cgccgttgcctcattgagatctttggcatcctgaaggagtatgaggtcggtgatccagga
caaagggctctattggatcctagtgtgctcaaaaaagatgaaaatactgtagatgacgaa
acactgatagagggcatggaggaagacggacaaatgggggaggaggaagaaggagaggaa
atacagaggtcaaaaccggaagaacaacacattgcacaagaacctctccaaattaaacag
gaggacaagctcatgacttgtgaagaatctgtgaagaaagaagatgggcaagcaatagac
ggagaacctaatacttcagatccaccatccctcgaggtggcggtggctcaggagaggcca
aagcaggctagcaagtttgataagcttcctttgaaggttgtaagaaaaaatgatcctttt
gtggtggactgctcgaataaacttggccggttgcaggaatttgatagtggcctactgcac
tggagtattggtggaggtgatacaacagaacacatccagacacactttgaaagcaagatg
gacctgtcacaactacgaaaacggtttcttcctgtccaggcctcggacaaaaagaaagga
gtgccgaaggatagccaggcaccttcaccgtcatctagtgaagagcacaggaaggaagtg
gatcgacaaccttctgaacagtcaactactgaaaaggtgactaatggaatttcagatacg
attgacgaaaggcctgctgactgcttagaatctgaggggaaatcaaatgtagagaaagat
caagagaagcaaggatcagagacgacaactccagagaacatcaggcctgcaccttcaagt
ccatcgttactgggtcagcgcaccatcgccatcttagaagatgagccacacagcaaggat
gaagctccacttgtcacactttctgactggcaagattctctctctcgtcgctgcatgtgt
gtctccaacattgtccgcagcctctcattcgttccaggcaacgacctggagatgtcaaag
catccagggttgctgctactactgggtcgccttttgcttctccaccatcggcatccagaa
cgcaagcaggcccctttaacttatgagaaagaagaggaggtggatgaaagcgttggcaag
aagaaagacgagtggtggtgggactgtctggaactgctgcgggaaaattgcttggttact
cttgccaacatctcaggccagcttgatttctctgtctacactgagagcatctgcctgcca
ctgttggatggcttgctccattgggctgtttgtccttcagctgaagcccaagaccccttc
cctagtctcgggcttaacggttcattgtcccctcagagactagtcctggagaccctctgt
aagctcagcattcaggacaacaatgtggacctcattctggcaacggcaccttttagtaga
ttagaaaagttgttcgggaaccttgtacgactagtcggagaacgaaaggtgcctgtctgc
cgggagatggcagtcgtgttgctagccaatcttgcacagggtgacagcatggcagcccgt
gccattgcggtacagaaagggagtgtagggaatcttttgggcttcttggaggacagctta
gcggctacacagtttcaacagagccaaggttccctaatgcacatgcagggaacacacttc
gagccgacaagtgtggacatgatgaggcgagctgctcgggctctgcttgctttcgcgaag
gtggaggagaaccactctgagtttacgctctatgaatcacggctactggacctttctgtc
tctccccttatgaactctatggtgtcccacgtcatctgtgatgtactctttttgataggc
cagtcatga
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integrated database retrieval system
