Misgurnus anguillicaudatus (oriental weatherfish): 129448299
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Entry
129448299 CDS
T09481
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
manu04812
]
129448299 (katnb1)
Cytoskeleton proteins [BR:
manu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
129448299 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_RIG_1st
PROPPIN
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
VPS8_N
Beta-prop_NUP159_NUP214
Ge1_WD40
WD_LRWD1
Beta-prop_LRRK2
WD40_like
Cytochrom_D1
PD40
Motif
Other DBs
NCBI-GeneID:
129448299
NCBI-ProteinID:
XP_055066545
LinkDB
All DBs
Position
1:complement(45837214..45846726)
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AA seq
694 aa
AA seq
DB search
MALTNTTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT
GHTSPVECIQFNSSEERVVAGSQSGSLRLWDLEAAKILRTLMGHKANISSLDFHPMGEYL
ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDGTIKLWDLIAGK
MITEFTSHTSAVNVVQFHPNEYLLASGSADRSVKLWDLEKFNVIGSSEGETGAVRSILFN
PDGSCLYSGSENTLRVYGWEPDRCFDVVHVGWGKVADLAISNNQMIAVSYSQNNVSWYIV
DLNRVKKSGSVIQGLIQDKPIPAPTSGLGTTLRRNYDRPTTSCTGQEMKQNSESDRRSPE
GERRSPSSEDEKDEKESSAEITNPEDYKEIFQPKSVISRTPPKQAEPFPAPLEHSFSESV
LEKPGPAVKIVTPVIDRAGQLKAPIISSTPVQRVEPTVISAARQLPVVTTSVPSPSRPVV
TTTKPKPPSTGIILSTRNEPIGLNAGDFLSHARNSKASVMGDEEALAQIRKGHDTMCVML
TSRYKNLYTVRSVWTSGDVKTSLDSAVSMNDLSIVVDILNIVNLKPSLWKLDLCTSILPQ
IEELLQSKYESYVQTGCTSLKLILKRFWPLISDTLTAPPSVGVDITREERHQKCKACYKQ
LKNLSNVVKNRAEQVGRHGSTFKELQLLMAPLDY
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggctcttaccaacaccacgattacatcatggaaattgcaggagatcgtggcacactcc
agcaatgtgtcctcgctggtgttgggaaaatcatcaggtcgtctgctggccacgggtggc
gaggactgccgagtcaatatctgggcagtcagcaaacctaactgcattatgagtttgacc
ggccacaccagtcctgtggagtgcatacagtttaacagctctgaagagcgtgtggttgcg
ggctctcagtctggctccctgcggctttgggatttggaggctgctaaaatactacgcact
ttgatgggccacaaggccaatataagcagtctggattttcaccctatgggtgaatacttg
gcgtctggatctgtggatagtaatattaagctgtgggatgtgagaaggaaaggatgtgtg
tttcgatataaggggcatacccaggctgtgcgctgtctagccttcagtcctgatgggaaa
tggcttgcttctgccagtgatgatggcacaataaagctgtgggaccttattgcaggcaag
atgatcacagaattcacatcacacacatccgcagtcaatgttgtgcagttccaccccaat
gagtacctgcttgcttctgggagtgctgatcggagtgttaagctgtgggacctggagaag
tttaacgtgattggctcatctgaaggcgagacgggagctgtgagaagtatattgtttaat
ccggatggcagctgcttgtacagcggctctgagaacacactacgagtatacggttgggag
ccagaccgctgctttgatgtggtgcatgtaggctggggcaaagtggctgatctggccatc
agcaataaccaaatgattgcagtgtcttacagtcaaaataacgtgagctggtatattgtg
gatctgaaccgagtgaagaagtcaggatctgtgattcaagggttgatacaggacaagccg
attccagcacccacatctggactgggaactacactacgtagaaattatgatcgacccact
acatcctgcactggacaggagatgaagcagaattcagagtcagatcgtcgtagtccagaa
ggagagaggagaagtcccagcagtgaagatgagaaagatgaaaaagaaagcagtgccgaa
atcaccaaccctgaggattataaagagatctttcagcccaagagtgtcatctcacggaca
cctccaaaacaggcagaacctttcccagcacccctggagcattctttttctgaaagtgta
ctagagaaacccggcccagcagtcaagattgtaactccagttatagacagagcagggcag
ttgaaagctccgattatctcctctacccctgtgcaaagagtggaaccaaccgtgatctca
gctgcacgtcagttgcctgtagtgaccacatcggtgccctcaccttctcgtcctgttgtt
actaccaccaaacctaaaccaccctctacaggaatcatcctctcaacacgcaacgagccc
attggccttaatgcaggggacttcctttctcatgcacgaaatagtaaagccagcgtgatg
ggagatgaagaggcattagcacagatcaggaaagggcatgacaccatgtgcgtaatgctg
accagtcgatacaaaaacctgtatacagtacgctctgtctggaccagtggagatgtaaag
acttccctggattctgctgtttctatgaatgacctctctattgtggtggacatcctcaat
atagttaaccttaaaccatctctatggaaattggacctctgcacttctatcctaccacaa
attgaggaattgctgcagagcaaatatgaaagttatgtccagactgggtgtacttctttg
aagttgatcctcaagcgtttttggccactgatctcagacacactgactgcccctccttct
gtaggggtggacattactcgagaggagaggcatcagaaatgtaaagcatgctataagcag
ctaaaaaaccttagtaatgtcgtgaagaatcgggcggagcaggttggtcgtcatggcagc
acctttaaagagcttcaactacttatggcccctctggactactga
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