Misgurnus anguillicaudatus (oriental weatherfish): 129449976
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Entry
129449976 CDS
T09481
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129449976 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129449976 (prpf38a)
Spliceosome [BR:
manu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129449976 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
129449976 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
129449976
NCBI-ProteinID:
XP_073726369
LinkDB
All DBs
Position
8:complement(9441259..9444281)
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AA seq
313 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFICLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKTQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSEDEDEEEEKQERVQTPEPHRRSYRDVDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERDRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKSRRREKE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaacagttaaagatgcgaacagtatacacggcacaaatcctcagtatctt
gtcgagaagattataaggacgcgtatttatgagtccaagtactggaaagaggaatgtttt
ggacttacagccgagctggttgtggacaaggctatggaattgaagtttgttggtggggtg
tatggaggaaacatcaagcccaccccattcatttgtctgaccctgaaaatgctccagatc
cagcctgaaaaggacattattgtggagttcatcaaaaacgaggattttaagtatgttcgt
ttgcttggagcaatgtatatgcgcctgactggcacctcagtggattgctacaagtattta
gaaccattatacaacgactacagaaaaatcaaaacccagaatagaaatggggagtttgag
ttgatgcatgtagatgagttcatagatgagctccttcatgcagagcgaatgtgtgacatc
atccttcccagacttcagaagaggcaagttttagaggaagctgaactgctggatactcgc
attagtgccctagaggaagacctggatgaggtggagaccagtgaggatgaggacgaggaa
gaagagaagcaggaaagagtacagactccagagccacacagaaggagttacagagatgtg
gaccgaccacgcagatccccatctccacgctacagacgaagccggtcacctagaagaagg
agcagatcccccaaaagaagaagcccatcacctagacgtgaacgagatcgggatcgccac
cgcagcaaaagtccccgtagacatcgcagcagatccagggacagaagacatcgttctaaa
tctccaggtcaccacagaagccatcggcatcgcagtcactccaagtccccagaaagccgg
tctaagaagagtcataagagtcgccgaagagaaaaagaataa
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