Misgurnus anguillicaudatus (oriental weatherfish): 129449984
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Entry
129449984 CDS
T09481
Symbol
dhx15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129449984 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129449984 (dhx15)
03009 Ribosome biogenesis [BR:
manu03009
]
129449984 (dhx15)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129449984 (dhx15)
Spliceosome [BR:
manu03041
]
Complex A
U2 snRNP components
U2 related factors
129449984 (dhx15)
Complex B
129449984 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129449984 (dhx15)
Ribosome biogenesis [BR:
manu03009
]
Eukaryotic type
90S particles
Helicases
129449984 (dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
AAA_25
Atrophin-1
Cas3-like_C_2
SRP54
Flavi_DEAD
AAA_29
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
129449984
NCBI-ProteinID:
XP_055068324
LinkDB
All DBs
Position
21:51065064..51094698
Genome browser
AA seq
764 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKRRSSDGKDRDRDRDERPKDRDRDRDRDRDRDRDRERDTKSSSA
ALSSSVPSGVGMIPLKQTAMHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILN
RHQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRVADEMDV
MLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDI
LMGVLKEVVRQRTDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDY
LEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYST
LPPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRI
RVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV
LQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQL
AKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVY
HAFKQNHEAVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRR
ALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCT
DIKPEWLVKIAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgacatcgcttggatttaggcgacgattattcgtcgagcaaaaggagatca
tctgacggtaaagaccgtgacagagatcgggatgagcggccaaaggatcgtgaccgcgac
cgtgaccgtgacagagatcgtgatagggacagagagagagacaccaagagctcgagtgca
gccctcagctccagtgtgcccagcggtgttgggatgatccccctgaagcagacagccatg
catcagcagatcaaccccttcaccaatctgcctcacaccccacgatactatgagatcctc
aagaagaggctgcagttgcccgtttgggaatacaaagaacggtttaatgatatcctcaat
cgtcatcagagctttgtgctggttggagagacaggctctggaaagaccacacagatccct
cagtggtgtgtagacatggtgagggctctccctggccctaagcgtggagttgcttgtaca
cagccacgtagggtggcagccatgagtgtggcacagagagtcgcagatgaaatggacgtc
atgcttggacaggaagttggatactctatcagattcgaggactgtagctctgcaaagacc
attctgaaatacatgacagatggtatgttactccgtgaggctatgaacgaccccttgctc
gagcgttatggtgtcattattctcgatgaggctcacgagcgtacgctagcaacagacatt
ctgatgggcgtcctcaaagaggtggtgcgtcagaggacagaccttaaggtcatcgtgatg
agcgccaccctggatgctggaaagtttcaagtttatttcgacaactgccccctgctcact
attcccggccggacacatcctgtagagatcttctacacacccgagccggagagagactac
ctggaggcagcgattcgcacagtcatccagatccacatgtgtgaggaagatgagggagat
gtactgctcttccttactggacaggaggaaatcgacgaagcttgcaagcggatcaaacgt
gaaatcgacgacctgggcccagatgttggagacatcaaaatcatccctctgtactccaca
ctgccaccacagcaacagcagaggatctttgagccgcctccaccacgcaaaccgagcgga
gccattggcaggaaggttgtggtttcaacaaacatcgccgagacgtccctgaccatcgac
ggcgttgtgtttgtaattgatcctggctttgccaagcaaaaggtgtataaccctcgcatt
cgagttgagtcgcttctcgtaacagctattagtaaagcttcagcccagcaaagagcaggc
cgtgccgggcgtacgcgcccgggcaaatgtttccggctgtatactgagaaagcctacaag
actgagatgcaggacaacacataccctgagattctcaggtccaatttgggttctgtggtg
ttacagctcaaaaagctgggtattgatgatctggtgcactttgacttcatggacccccca
gctcctgagacgctgatgcgagccctggagctgttgaactatctagcggcgctgaatgac
gacggtgacctgacggagctgggctccatgatggctgagttcccgctcgacccccagctg
gccaagatggttatcgccagctgtgagttcaactgctccaatgagatcctctccatcact
gcaatgttatcagtcccacagtgctttgtgcgacccaccgaagctaagaaggcagccgac
gagtccaaaatgaggttcgcccatattgacggagaccacctgaccttgctcaacgtctac
cacgcctttaaacagaaccacgaggctgtgcagtggtgctacgataacttcgttaactac
cgctccttgatgtcggctgataacgtgcggcagcagctctcccgcatcatggaccgcttt
aacctcccacgacgcagcacagagttcaccagccgagactactacatcaacatccgtcgt
gctctggtcaccggcttcttcatgcaggttgctcacctggagcgtacgggacactatcta
acggtgaaggacaaccaggtggtccagttgcacccttccacagtactggaccataagccc
gagtgggttctctacaacgagttcgtgctgaccaccaagaactacatccgcacctgcact
gatataaaacccgaatggctggtgaaaatcgctccacagtactatgaaatgggcaacttt
cctcagtgtgaagctaagaggcagttggagcgcatcgtcgctaaacttcaaaccaaggaa
tactcgcagtactga
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integrated database retrieval system
