Misgurnus anguillicaudatus (oriental weatherfish): 129450255
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Entry
129450255 CDS
T09481
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04140
Autophagy - animal
manu04148
Efferocytosis
manu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129450255 (vps16)
04148 Efferocytosis
129450255 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129450255 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129450255 (vps16)
Membrane trafficking [BR:
manu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129450255 (vps16)
Hops complex
129450255 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
129450255
NCBI-ProteinID:
XP_073726850
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Position
8:complement(34083651..34101579)
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AA seq
839 aa
AA seq
DB search
MAFVTANWNPLGDAFYRKIELYEMTWNLRDGLKDCLKNGMIAAAPYGGPIALLRLPQQRS
PSTRPQLEIYSSSGLALASFPWKSGEVKQLGWTVSDELLCVQEDGTVLVYDLFGSFKRHF
SMGNEVSQSRVLETKIFHSPYGTGVAILTGASRFILASNIEDVKPRRLAELLGLQGAPTC
WAVLSQDRQSKVLVSNGSNLYILDNATCTSVTPPGLSPQASSVIHMCVSFSYKYLALLTD
SGHVWMGTSNLKEKLSEVDTNIKTPPKQMAWCQRPKSQQPSVVIMWDGLLLVVGECKETI
QYHLDEDCLLVPELDGIRIINKTHHELLQEVPDACEEIFKIASMAPGALLLEAYKEYEKK
SQKSDEYLREITEQNLLGEAVKQCVEAAGHEHEPETQKTLMRAASFGKCFLSSFPPEPFV
SMCRDLRVLNAVRDYTVGMPLTHSQFKQMTLQILIDRLVYRKFYPLAIEICRYLKIPEYQ
GVSRVLKHWACYKVQQKGESDEVIAKAMSAKLADAAGISYSEIATTAYDSGRTELAIKLL
DHEPRSGEQVPLLLKMKKSPLALSKAIESGDTDLVYTVVMYLKNELNRGDFFMMLRNQPV
ALSLYRQFCKHQEQETLKDLYNQDDDHQELGNYYVKASYKEPRLEARIGLLQSAVDEFYK
AKNEFAAKATEEEMRLLRFQRKLEEEKGEPLVGFSLHDTITALLSVGLHKHAEQLYKDFK
VPDKRYWWLKLKALAEKGDWEELEKFAKSKKSPIGYLPFVEVCIKHHSKYEAKKYVSRVT
PEQKVKAHLAVGDLESATEAAIERRNESEISAVLSRCSANTDQALMERLNRAKATAVKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtcacagcgaactggaatcctttgggagatgcgttttacagaaagattgag
ttgtatgagatgacctggaacctgagggatggtctaaaagactgtctgaaaaacggtatg
atcgcagcagctccatatgggggtcccatcgctctcttaaggttgccccaacaacgctcg
cccagtaccagacctcagttagaaatctactcttcttctggattggctctggccagcttc
ccgtggaaaagtggtgaggtgaaacagctaggatggacggtgtctgatgaactgctgtgt
gttcaggaagacggcactgttcttgtctatgatctcttcggaagctttaagagacacttc
agcatgggcaatgaagtttctcagagtcgcgtgctggagaccaagattttccattcgcct
tatgggactggagttgctatattgacaggtgcgtcgcggttcattctggcctcaaacatc
gaagacgtaaaaccgaggaggctagctgaacttctaggtttacagggggcacccacgtgc
tgggcagtactgtctcaggacaggcaaagtaaagtgctggtttccaatggatctaatctg
tacatcctagataatgcaacctgtacatctgtgactcctccaggtctctctccacaagca
tccagtgtgattcacatgtgtgtctcattcagttataaatatctggctctcctcacagac
tctggccatgtgtggatgggtacttccaacctaaaggagaaactcagcgaggtagacacc
aatatcaaaactcccccaaaacagatggcatggtgccagcgacccaaaagtcagcagcca
tcagtggtgatcatgtgggacgggctgttactagtagtgggcgagtgtaaagagactatt
cagtaccaccttgatgaagactgtcttctggtgccagaattggacgggatcaggatcatc
aacaaaacacaccatgagcttctgcaagaggtcccagatgcatgtgaagagatctttaaa
atagcttcaatggctcctggagctttacttctggaggcatataaagaatatgaaaaaaag
agccagaagtcagatgagtatctaagagagatcaccgaacagaatctgctgggcgaggcg
gtgaagcagtgcgtggaggcagccggtcacgagcatgaacccgagacgcagaaaactctc
atgagggctgcctcatttgggaagtgtttcctgagcagttttcctccggagccgtttgtc
agtatgtgtcgggacctacgggtgttaaatgcggtccgagattatacagtcggcatgcct
ctcacccactctcagttcaaacagatgactttacaaatactcatcgacagactggtgtat
cgtaaattctatccactggccattgagatttgccggtatctaaagattcctgaatatcag
ggagtgagtcgagtgcttaaacactgggcctgctataaggtccagcaaaagggggagtca
gatgaggtcatagcgaaagccatgagcgcaaagcttgccgacgctgctggaatctcttac
tcagaaatcgccactacagcatatgacagcggacgcacagagctggctattaaattattg
gatcacgagccgcgctctggtgaacaggtgccgctgttgttaaaaatgaagaagagtcct
ctggctttaagcaaagccattgagagtggagacacagacctcgtgtatacagtggtcatg
tacctgaagaatgagctaaacagaggagacttcttcatgatgttgagaaaccagcctgtg
gctctaagcctttatagacagttctgtaaacatcaggagcaggagacattgaaggatctc
tacaatcaagatgatgatcatcaagaacttggcaactactatgtaaaggccagctataaa
gaaccgagactggaggctcggattggtctcttacaaagtgcggtggatgagttttacaaa
gccaaaaatgaattcgcagccaaggccacggaagaagaaatgcgtctcctgaggttccag
aggaagcttgaggaggagaagggcgagccgctggtgggattctctcttcatgacaccatc
accgcactgctgtctgtgggactacacaagcatgccgagcagctctacaaggacttcaaa
gtacccgataagaggtactggtggctgaagctgaaggctctggctgagaagggggactgg
gaggaactggagaaatttgctaaaagcaagaaatctcctattggatatctgccgtttgtc
gaagtgtgcataaaacaccatagcaaatatgaagcaaagaaatatgtttccagagtcaca
ccagagcagaaggtcaaagctcacctcgcagtaggggatctggagagtgcaacggaagcg
gctatcgagaggcgtaacgaatccgagatcagtgccgtcctgtcacgctgttcggccaac
actgatcaggcattgatggaacgtctaaaccgggctaaagccaccgctgtcaaaaagtga
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