Misgurnus anguillicaudatus (oriental weatherfish): 129450643
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Entry
129450643 CDS
T09481
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129450643 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129450643 (smarcc2)
03036 Chromosome and associated proteins [BR:
manu03036
]
129450643 (smarcc2)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129450643 (smarcc2)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129450643 (smarcc2)
PBAF complex
129450643 (smarcc2)
GBAF(ncBAF) complex
129450643 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM-assoc_3
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
129450643
NCBI-ProteinID:
XP_055069544
LinkDB
All DBs
Position
8:13808876..13828959
Genome browser
AA seq
1032 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPIKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFLTIEKSLVQNNCLSRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKPSSSHVVVP
IPASLEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISANEVEAAVEDPPTAEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPRRKRISAKTLTDEVSTPDERRDKKPSSAKKRKRSPS
PSPTPPLQENKKKNTKKGPTTPYTKSKRGQREEEPEDLTKELDEPSPVPAVEEATLPKTV
TKKDSDSTPVKGGTMTDLDEQEDESMETVGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTH
HIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLV
PLQPKASQTSTSQQMLSFPEKVKDKPTDLQNFGLRTDMYSKKSGSAKNKNAASATREWTD
QETLLLLEGLEMCKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASMGPLAYQP
IPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAA
RNSGRPDPLYGLEGSGIAGTGLEDSDKPAEESSEETKSSDGQFSQEKRDNKETKDGASEE
EEKQGENGKKEEERAREAEPERETEKTDTEMDGEKEKERKEATEEGQRDAESEVEKKAKV
ERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL
ETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQHHSNQPGNQPAA
PSVTHQPVPNASAPPPTPSPASATAANAHEAPPPVASHSSPPTNAQAGAAHDSSTPLTGD
PLYPNAPVAPTQ
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggcccgaatgtaaaatatttcgaggcgtctgatacc
gtctcgcagttcgacaatgtccgggtctggctgggcaagaattataaaaagtatattcag
gcagagccccccaccaataagtctttgtcaagcctggtggttcaactgcttcagtttcaa
gaggaagtgttcggccggcatgtcagcaacccaccccttacaaaactaccgataaagtgt
tttctggatttcaaatctggaggagctttgtgtcatattctagctgctgcctacaagttc
aagagtgatcaaggatggaggagatttgacttccagaacccttcaaggatggaccgcaat
gttgaaatgtttctaactatagaaaaatcgctagtacagaataactgtttatcccgacct
gtgatttacctgagttcagacatagagccaaagctactgggaaagctgaaggacattatc
aaaagacaccaggggtctgtgactgaggataaaccatccagttcgcatgtagtggtgcct
attcctgctagtctggaggacgaggaatgggtccgccctgttatgaaaagagacaaacag
atgctgctgcactggggttactggccggacagttacgatacatggatttcagccaatgag
gtggaagctgcagtggaggatccgcccacagctgagaaacccaggaaggttcatgcaaag
tggattctcgacctggatcagtttaacgagtggatgaacgaagaagactatgaggtggga
gagggaggaccgaggaggaagaggatttcagcaaagaccctcacggatgaagtgagcact
ccggatgaaaggagggacaaaaagccaagcagtgccaaaaagagaaaacgctccccttct
ccatctccaacccctcccctgcaggaaaacaaaaagaaaaacacaaaaaaggggcccact
actccctacactaagtccaaacgagggcagagagaggaagaaccggaagatctgacaaaa
gaactagatgaaccttcacctgtacctgcagtggaggaagccacactacctaaaacagtg
actaaaaaggactcagattctactccagtcaaaggagggacaatgacggacctggatgag
caagaggatgaatcaatggaaaccgtaggaaaggaggaagaagagggttcccccagtgtg
aagggagagccggtaaagggttcggacctccatgaggataatgtcactgaacagacccat
catatcattataccgagttatgctgcttggttcgattacaacagcgttcatgccatagag
cgcagagcactgcctgagttttttaatgggaagaacaaatccaaaactcctgaaatttat
ctggcttaccgtaacttcatgatcgacacatatcggctgaacccacaggagtatttgaca
tccacggcttgccgtaggaaccttgccggagatgtttgtgccattatgagggttcatgcg
tttttggaacagtggggattgattaactatcaggtggattcagagagtcgtccgactccc
atgggacctccacccacctcgcactttcatgtgctggctgacactccttcaagtcttgtc
ccactacagcctaaagcatcacagacttcaacttcacaacagatgctgtcattcccagaa
aaagtgaaggacaaaccgaccgacctgcaaaactttggactgaggacagacatgtacagc
aaaaagtctggctcggctaaaaataaaaatgcagccagtgccactcgagaatggacggac
caggagaccctactgctgctggagggtctggagatgtgtaaggacgattggaataaagta
tccgagcatgtaggcagccgtacgcaggacgagtgcatcctccatttcctacgtctcccg
attgaagacccgtacctggaggatagctccgcctccatgggcccactagcctatcagccg
atcccattcagtcaagctggaaatcctgtcatgagcacggtggcatttctggcttctgtg
gttgaccctcgagtggcctccgccgcagctaaatctgcccttgaggagttctctcgtatg
aaggaggaggtgccagccgcgttggtggaggctcatgtgcgtcgggtggaggaggcggcc
agaaacagtggcaggccggaccctctctatggcctggaggggagcggcatcgctggcacg
ggccttgaggattcagacaaacccgctgaggagagcagtgaggagaccaagagcagcgat
ggccaattcagccaggaaaagagggacaataaggagaccaaagacggagccagtgaagaa
gaggagaaacaaggagagaacggcaagaaagaggaagaaagagcaagagaagcagaacca
gagagagaaacagagaagacagatacagaaatggatggcgagaaggagaaagagcggaag
gaggcaacggaggagggtcagagggacgcagagagcgaggtggagaagaaagcgaaggtg
gagagggatgtaggagaaggaaacctggccaccgctgccgcttctgcacttgctgctgca
gctgtgaaagcaaaacacctggctgcagtggaagagaggaagatcaaatctctggtggct
ctgctggtagaaactcagatgaagaaactggagatcaaacttagacactttgaagagttg
gagaccatcatggaccgagagagagaggcgttggagtatcagaggcagcagcttctcgct
gatcgtcagtcctttcatatggagcagctaaagtatgcggagatgagagcccgacagcaa
cacttccagcagatccaacaccagcatcacagtaaccagcctggcaatcagccagcggct
ccatctgtgacccaccagcctgtccccaacgcctcggctccacccccaacaccaagcccc
gcctcagcgacagccgctaatgctcacgaagctccgcctccagtggcttctcacagttca
ccccccaccaacgcacaggctggagcagcacacgattccagtactccattaacaggggat
cctctctatccaaacgcccccgttgccccaacgcagtaa
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