Misgurnus anguillicaudatus (oriental weatherfish): 129451430
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Entry
129451430 CDS
T09481
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129451430 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129451430 (sf3b1)
03036 Chromosome and associated proteins [BR:
manu03036
]
129451430 (sf3b1)
Spliceosome [BR:
manu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
129451430 (sf3b1)
Complex B
129451430 (sf3b1)
Complex C
U2 SnRNP specific factors
129451430 (sf3b1)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129451430 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
HEAT_Maestro
GST_N_4
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
129451430
NCBI-ProteinID:
XP_073711349
LinkDB
All DBs
Position
17:complement(26365082..26374199)
Genome browser
AA seq
1316 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKAALVEGTDQGVGLDSTGFFDQEIYGGSDSRFAGYVTSI
AANEQEEDDDEDSSTSLLGQKKPGYHAPVAILNSIPQSDEQYDPFAEHRPQKISDREDEY
KKRRQKMIISPERHDPFADGGKTPDPKQQIRTYMDVMKEQHLSKEEREIRLQMVEKAKSG
ELKAVNGSAASQAAAAAKRKRRWDQTADQTPGNTTPKKVSSWDQADSASDTPGHTPGHTP
SNSRWDETPGRAKGSETPGATPSSRMWEPTPSHTPAGAATPGRDTPGHATPGHGGATGSV
RKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPASQMGS
STPILTPGKTPLGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMF
PEGYKVLPPPAGYVPIRTPARKLAATPTPIGGMTGFHMQVEDRTTKQMNDQPSGNLPFLK
PDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGA
GPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFL
KAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALA
IAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTRE
VMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRR
NYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGATDIDHKL
EEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVR
QQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHK
MTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKA
HKKAIRRAAVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV
LPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA
SAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQ
YCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPLVYNDEKNSYVRYELDYFL
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacacacgaagacattgaggctcagatcctggaaatccagggg
atgaaagccgcccttgtggaggggacagaccagggtgttgggctcgattccactggattt
tttgaccaggaaatctatggaggcagcgacagccgctttgctggatatgtgacttcaatt
gctgcaaatgaacaagaagaggatgatgacgaggactcgtcaacaagtctccttgggcaa
aagaaaccaggatatcatgctccggttgcaatactcaattccattcctcaatcagatgag
cagtacgatccatttgctgaacacagaccacagaagatctccgaccgtgaggatgagtac
aagaaacgcagacaaaagatgatcatctccccagagcgtcatgaccctttcgcagacggg
ggcaaaacgccggaccccaagcagcagatcaggacgtacatggatgttatgaaggagcag
catctgtccaaagaagagagagaaatcaggctgcagatggtagagaaagcaaaatctggg
gagctgaaagcagtgaacggctctgctgcgtctcaggctgctgcagcagccaaacgcaaa
cgtcgatgggaccagacagccgaccaaacccccggcaacaccacacccaaaaaagtgtcc
agttgggaccaggcagatagcgcttctgatacaccgggacacacaccaggacacacacct
tccaacagccgttgggatgagacacctggccgcgccaaaggtagtgagaccccaggagcc
acaccaagttcacgtatgtgggagcccacacccagccacaccccagccggagctgccacg
ccgggtcgggacacccctggccatgccactcctggtcatggtggggcgacaggcagtgta
cgcaagaatcgctgggatgagactccaaaaacagagagagagacgcctggtcatggtagt
ggctgggctgagacgccacgcacagacagaggagatgagtcggtaggtgagacgcccact
ccgggtgcaagcaagaggaagtcaagatgggatgaaacgccagccagtcagatgggctct
tcaacacctatcctcactcctggaaagacacctctgggcacacctgctatgaacatggcc
acgcccactccaggtcacctgatgagcatgactccagaacagttgcaagcttggcgttgg
gagcgagagattgatgagaggaaccgcccactgaccgatgaggaacttgacgccatgttt
ccagaaggatacaaagtactacccccaccagcaggctatgtgcccatccgcacccctgcc
cgtaaattagctgccacccccactccaattggaggcatgactggtttccacatgcaagta
gaagacagaactacaaaacaaatgaacgaccagccctctggaaacctgcccttccttaaa
ccagatgacatccagtacttcgacaaactgttggttgaagttgatgagtccaccctcagc
ccagaagaacagaaggaacgcaagatcatgaagctcctcctgaagatcaagaatggaaca
cctcccatgagaaaggctgcactccgtcaaatcacagataaggccagagagtttggtgcc
gggcccctctttaaccaaatcttgcccctgctgatgtctcctacgctggaggaccaggag
cgacatctcttggtgaaggtcatcgatcgtattctctacaaacttgacgacttggttcga
ccttacgtccacaagattcttgtggtgattgagcccctcctgattgatgaagattactat
gctagagtagagggtagggagatcatctccaatttggcaaaggctgccggtctggccact
atgatttcaaccatgagacctgatattgacaacatggacgagtacgtgagaaacacgaca
gcgcgtgcttttgctgttgtggcatctgctctgggcatcccatctctccttcctttcctc
aaggctgtgtgtaaaagcaagaaatcctggcaggctcgtcacacaggcatcaagattgta
cagcagatcgccattctcatgggctgcgctatcttgccccatctccgcagcttggtggag
attatagagcatggtcttgtggatgagcagcagaaagtacgaaccatcagtgctttggct
attgctgccctggctgaagctgccaccccatatggtatcgagtcttttgattctgtactg
aaacctctttggaagggtatcaggcaacacagaggcaagggtcttgctgccttcttgaaa
gctattggatacttgattcctcttatggatgctgaatatgccaattactacaccagagaa
gtgatgcttattctcatccgagagtttcagtctcctgatgaggagatgaaaaagatcgtc
ctcaaggtcgtgaagcagtgctgtggcacagacggtgtggaagccaattacattaaaaca
gaaatcttgccaccattcttcaaacatttctggcagcatcgaatggcattagataggcgt
aactacagacagttggtggacactacagtggagctggccaataaggtgggggcagctgag
atcatttcgcgtatcgtggacgacttgaaagatgaagctgagcagtacagaaagatggtt
atggagaccatcgagaaaatcatgggtaaccttggtgcaaccgacatcgatcacaaactg
gaagagcagcttattgatggtatcctgtatgctttccaagaacagaccacagaggactct
gtgatgctgaatggctttggtacagtggtaaacgctctgggtaagagagtcaaaccgtac
ttgcctcagatctgcggtacagtgctgtggcgtctcaacaacaagtccgctaaagttcgt
cagcaggccgctgacctgatttcccgcacggcggtagtcatgaaaacatgtcaagaggaa
aagctgatgggacatttgggtgtggtgttatacgagtacctgggagaagaatacccagaa
gtgcttggtagcatcctaggagcccttaaagctattgtgaatgtcattggtatgcacaag
atgacaccacctattaaagacttgcttccacgtttgacgcccatcctgaaaaacagacat
gagaaggtgcaggagaactgcattgatctagtgggcagaattgctgacaggggtgcagag
tatgtgtctgccagggaatggatgcgcatctgttttgaattgctggagctgttaaaagcc
cacaagaaggccattcgcagagctgccgtcaacactttcggttacattgccaaggccatt
ggtcctcatgacgtgttggctacactgctcaacaatctaaaggtacaggaacgtcaaaac
agagtttgcacgacggtagccatcgctattgtggccgagacgtgttcacccttcactgtg
ctccccgcattgatgaacgagtaccgcgttcctgagcttaacgtccagaacggtgtcctg
aagtctctgtctttcctgtttgagtacatcggtgaaatgggcaaagattacatttatgcc
gtcacacctctgttagaggatgctttgatggacagagatttggtgcacaggcagacggcc
agtgctgtggtgcaacatatgtcattgggtgtctatggctttggatgtgaggactctctc
aaccatttgctcaactacgtctggcccaatgtctttgaaacgtctcctcacgttatccaa
gctgtaatgggggcccttgagggtctgcgggtggcgattggtccttgccggatgctgcag
tactgcttgcagggtttgtttcaccctgctcggaaagtacgtgatgtgtactggaagatc
tataactccatctatatcggctcccaggatgcactgatcgcccactaccctcttgtctat
aatgatgagaagaactcttatgttcgttatgagcttgattactttctgtga
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