Misgurnus anguillicaudatus (oriental weatherfish): 129451520
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Entry
129451520 CDS
T09481
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
manu03037
]
129451520 (ift88)
Cilium and associated proteins [BR:
manu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
129451520 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_6
TPR_14
TPR_16
TPR_7
TPR_11
ANAPC3
TPR_9
TPR_17
SNAP
ARM_TT21_5th
TPR_10
TPR_CcmH_CycH
TPR-S
ARM_TT21_4th
TPR_15
ARM_TT21_2nd
RPN7
TPR_MalT
HAT_PRP39_C
ARM_TT21_C
DUF6584
Coatomer_E
DUF2225
Consortin_N
SHPRH_helical-1st
DUF2989
TPR_4
HEAT_Nup120
Evf
RNPP_C
Motif
Other DBs
NCBI-GeneID:
129451520
NCBI-ProteinID:
XP_055070695
LinkDB
All DBs
Position
17:complement(18829621..18842425)
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AA seq
854 aa
AA seq
DB search
MENVHLAPEEEEDDLYTGYNDYNPTFDSDDLHNDVAFQQAVRTSHGRRPLMTAKYPGTAI
GGRPIGTAFGSRMPIGTAMGRPMTGAVQDGAARPMTAVRAAGYSSSLAKGSLFDPLGQSK
GPAPPLETKNVDTPEEKIKIMEKKVNDLIEESCLAHARGDLQLSLEKAKEAGRKERALVR
QREQTGTADHINLDLTYSVLFNLANQYGNNDMYTEALNTYQVIVKNKMFNNAGRLKVNMA
NIFFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVFTHMGQYSDAITSFEYIMS
ESPNIKTGFNLILCYYAIGDREKMKKAFQKLICVPLGIDDEDKYIPPNDDPHANMVIEAI
KNDKLHQMERERKALAEKYIMTSAKLIAPAIETSFAAGFDWCVDMVKGSQYVELANDLEI
NKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFLEKDFDQADRYAELAMSA
DRYNPAALINKGNTVFVKEDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEEALD
CFHKLHAILRNSAQVMYQLASLYEMLEDPHQAIDWLMQLTSVTPTDAQVLAKLGDLYDNE
GDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEVQEYATKLKKVEKM
KEIKEQRVRSGRESSARSRREGSAGSGSSSSPINTPPLRTSASRSEAKYSPVLEQGRDSG
QSSHGTSAKGERLSVKLKTLPGSNEPYEASTQEIDASYVDPLGPQMQRPKTAARKRNEED
EFADEELGDDLLPE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtgcatcttgccccagaagaagaggaagatgatctctatacaggctacaat
gactacaatcccacgtttgactcagatgatctacacaatgatgtggcctttcagcaggca
gtaaggactagtcatggaagaagaccacttatgacagcaaaataccctggcactgctatt
ggagggcgaccaattggaacagcttttggatctcgaatgcctattggcactgcaatggga
agaccaatgactggagctgttcaggatggtgcggctcgtcccatgactgcagtgagggca
gcaggatactcatcatcactggctaaaggctcactgtttgatcccctgggtcaatcaaaa
ggtccagcacctcccctggagacaaagaatgtagacactccagaggagaagataaagatc
atggagaagaaggtgaatgatttgatagaggagagctgtctcgcgcatgcacgtggagat
ctacagctgtctctagagaaggccaaagaggcgggcaggaaggaaagagcgctggtgagg
cagagagaacaaacgggcactgcagaccacatcaatctggatctgacatactctgtgctg
tttaatttggcaaaccagtatggcaataatgacatgtacacagaggccttgaacacctat
caagttattgtaaaaaataaaatgttcaataatgctggacgattaaaggtaaacatggca
aatatctttttcaagcaaaaaaactacacaaaagccatcaagttttaccgcatggcttta
gatcagatctcaaatgcccacaatgcaatgaggatcaagatcatgcagaacattggagtt
gtgtttacacacatgggccagtactcggatgcgatcacctctttcgagtacatcatgagt
gagagccccaatataaagacaggttttaacctcatcctgtgctattatgccattggagac
cgtgagaagatgaagaaggctttccagaaactcatttgcgtgcctcttggtatcgatgat
gaagacaagtatatccctccaaatgatgaccctcatgcaaacatggtgattgaggccata
aagaatgataagcttcaccaaatggaaagggaaaggaaagcactagcagaaaaatacatc
atgacctcagctaagcttattgccccggccatagagacatcatttgcggctggctttgac
tggtgtgtagatatggtaaagggttcacaatatgtggagttggcaaatgacttggagatc
aacaaagctattacttacctaagacagagggactttaaacaggcagtcgagaccctaaag
atgtttgagaaaaaggacagtcgggttaaaagcgctgcagccactaacctttcctttctt
tattttttggagaaggattttgaccaggctgaccgctatgctgagttggctatgagtgct
gaccgctacaaccctgctgccctcattaacaagggcaacacagtgtttgtaaaggaggac
tatgagaaagcagcagagttttataaggaagctcttcgtaatgattcatcctgcactgag
gctctctataacttaggtttgacctataagagactgggtaggctggaggaagcactggac
tgtttccacaagctgcacgctatcctcagaaacagcgctcaagtcatgtaccagttggct
agtctatatgagatgttggaggaccctcaccaggccattgattggttgatgcagctcacc
agtgtgacccccacagatgcccaggtgctggccaaactgggagatctctatgacaatgag
ggggataaatcacaggctttccagtactattatgagtcatacaggtattttccttcaaac
attagtgtcattgaatggttgggggcatattacattgacacccagttctgtgagaaagct
attcagtattttgagagagctacactcattcaaccaacacaggtaaagtggcagctgatg
gtggccagctgttacaggagaagtggaaattatcagaaagcacttgagacttacaaggac
attcatcggaaatttccagaaaacgttgaatgtctgcgctttttggtaaggctgtgcaca
gatatgggattaaaggaggtgcaggagtatgccaccaaactcaagaaagtcgagaaaatg
aaagagatcaaagaacagagagtgagatctgggagggagagcagtgctcggagtcggaga
gaaggtagtgctggcagtgggagcagctcaagccccatcaatactcctcctctgagaacc
agtgcttctcgctctgaagctaaatatagccctgtactggaacagggcagagacagtgga
cagagcagccatggcaccagtgccaagggtgagcggctgagtgttaagctaaagacgctt
ccagggtccaatgagccatatgaggccagcactcaggaaatagatgcttcttatgttgat
ccgcttggacctcaaatgcagagaccaaagactgcagcaaggaaacgtaatgaggaagat
gagtttgctgatgaagagctgggagacgacttactgcctgaatga
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integrated database retrieval system
