| Entry |
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| Symbol |
col18a1a
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| Name |
(RefSeq) collagen type XVIII alpha 1 chain a isoform X1
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| KO |
| K06823 | collagen type XVIII alpha |
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| Organism |
manu Misgurnus anguillicaudatus (oriental weatherfish)
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| Brite |
KEGG Orthology (KO) [BR:manu00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:manu04147]
129451654 (col18a1a)
00535 Proteoglycans [BR:manu00535]
129451654 (col18a1a)
00536 Glycosaminoglycan binding proteins [BR:manu00536]
129451654 (col18a1a)
Exosome [BR:manu04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129451654 (col18a1a)
Proteoglycans [BR:manu00535]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
129451654 (col18a1a)
Glycosaminoglycan binding proteins [BR:manu00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
129451654 (col18a1a)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
17:33495084..33604600
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| AA seq |
1828 aa
MMPGFRMWLCLFVLACMRIQHSHGWFWSGSDGKGTRTPVNLTTLNPTSPSRTEAPPSTAG
TSASVTEVPKVAEKLGMYVRYGDGFEGSAREGGSGLFKSESLSRSELASGSGSSQFESQE
SYVTPTDLSGISVESTNVQMESKVDRMDGHNSSFVERQFNQSIVSLKNNLFGDNSSKHDS
YNTTQYSLEYSVSDNVLTNESDRSVITPRCLEVHSKLPFCTRTGAKSFAVPNFLNQSSVE
EVKVVLSKWASLLRSHCHHSLEWFFCLLLMPRCGPPGLPAPMPCRSFCEVLRDSCWTLLD
EGRLPVECHSLPEEPHDGYQCLSVSNQKEQNGISLLQLIGDPPPDGITEHYGPDNSLGYM
FGPSSNVGQSAAAHLPNPFYRDFSLIFNIKPTSTKPGVIFSITDPSQDFMYVGVKLSEVQ
NDQQDIIFYYTEPDSEKSYEAARFSVPSMLNTWTRFSISILNEKASLYFKCDSDPQVVNF
ERSPDDMDLDAGAGVFVGHASRADPDKFLGVIGDLRVLKDPGAAQRHCEEDEDDYDMTSG
DGPSGYGESETTSVQVTPPSSRPIQQPPVTSVIQQTGSVELSRRISGSHGDSRQTSGSYG
DSRQTGSHGGSRKTSGSYGDSQQAGSHGDSHQTSGSYGDSRQAGSHGGSRKKSGSYGDSR
QAGSHGGSRKKSGSYGDSRQTVSHGGSRQTGSDSDSRQTGSHSDSRQTSGDTGKTHTLVD
ISKQILVSHDVSRQASSTVDHSLRASGSADDGLRYSVESRLGPAGTAGSVGAKGDKGDRG
EKGAKGDRGLVGPKGDSGSASVSGGGSKGEKGEIGEKGMKGGPGFGYPGSKGDRGPPGPQ
GPPGPPGPSAEVEVRGDGSVVERVTGPRGPPGPPGPPGPTGTDGEPGDPGEDGKTGPVGP
PGFPGTPGNTGPKGEKGDRGDGNPGPRGPPGPPGPPGPPTRSDRPTFVDMEGSGFDAENM
RGPPGLQGPPGPPGLPGPPGPESAASGGFGPPGPPGQNGAPGQPGLPGTPGADGKSGLPG
PKGEKGDAGDLGLPGPLGEKGAQGVPGTPGLPGESGLAGLPGPMGPVGPPGPPGPPGPSY
RVGFDDMEGSAFEFGSISGVRGPTGVRGPPGLPGQPGKPGFPGLPGEKGSEGPQGIDGRP
GLDGFPGPQGPKGFKGDQGERGEPGRDGNGLPGPPGPPGPPGQIVYRNSEHYDATGEAGP
QGGSGRPGQAGFPGPMGPKGDRGEPGAPGYGIKGEKGEPGYVLGPDGNPLYPGGLGGIGE
RGIPGPVGPPGPVGPPGPKGEFGMPGRPGRPGVNGYKGEKGDPGSGSGYGYPGQPGPPGP
PGPPGPAAPLDRFRYEDFVRQYTATKGEKGEQGLPGVPGTPGFTSDIDIYTLKNEMKGER
GEPGPRGEKGEPGGGFYDPRFGAIAGPPGNPGLPGPKGDSITGPPGPQGPPGPPGVGYDG
RPGNPGPPGPPGPPGSPSLPGPYRPSLSIPGPPGPPGPPGIPGHGTGVTVLRSYDIMLAT
ARRQTEGALIYIMDRSDLYLRVQNGVRQVMLGDYKPFYVDLDNEVAAVEPPPVVPYSQDH
TANNGAEQISPPHQPVDLPRESENRNPSPPETFYPEPQYPPLPDPRYPPNTDSRYDSGQS
PIRYPERYPVTPPRRPSPPVNQPEGHTHTSGPGLHLIALNSPQVGNMRGIRGADFMCFQQ
ARAVGLKGTFRAFLSSKLQDLYSIVRRSDRDTLPIVNLKDQVLFRSWESLFSDSESRMKD
GASIYSFDGRDVLRDSAWPEKMIWHGSNGKGHRQTDNYCETWRTGDRAVTGLSSSLQTGQ
LLHQTPSSCSSSYIVLCIENSYMSQFKK |
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| NT seq |
5487 nt +upstreamnt +downstreamnt
atgatgcctgggttcaggatgtggctgtgcctttttgtactggcgtgcatgaggattcag
cactcacatggatggttctggtctggttctgatgggaagggcacacggacaccagtcaac
ctgactactttaaaccccacatcaccatcaaggacagaagcaccacccagtacggcaggt
acaagtgcttctgtgaccgaggtccctaaagtggccgagaaattaggtatgtatgtgaga
tatggagatgggtttgaggggtctgctagggagggtggctctggattatttaagtctgaa
tctttaagtaggtctgaacttgcttctggatctggatcttctcagtttgaaagccaggag
agctatgttacaccaactgacttgtcgggcatttcagttgagagtactaatgtgcaaatg
gagagcaaagtggatcggatggatggacacaacagcagttttgtagaaaggcaatttaac
caaagcattgtttctttaaaaaataatttatttggggataattcttctaagcatgatagt
tataacacaacacagtattcccttgaatactctgtctcagataatgtactaaccaatgaa
agtgaccgatctgttataaccccacgctgcttggaagttcattccaaattgccattttgc
accagaacaggagcgaagagtttcgcagtgcctaattttctaaatcaaagcagcgtggag
gaagttaaggtggttttaagcaaatgggcgtcgctgttacggtcacactgccaccatagc
ttggaatggtttttctgcttgctgttgatgccgcgatgcggcccacctggactgccggcc
ccaatgccctgtcgcagtttttgcgaggtcttgcgcgacagctgttggacgctgctggat
gagggccgcctccccgtggagtgccattctctgcctgaagagccgcatgatgggtatcag
tgcttgtcagttagtaaccagaaagaacagaacggtatatcactgttgcagttaatcggt
gatcctccaccagatggcatcactgaacactatggccccgataacagccttggctacatg
ttcgggccgagctccaacgtgggccaatcagctgcggcccacctccccaacccattctac
cgcgacttctcactgatcttcaacataaaacctacatccacaaagcctggcgtcatcttc
tccatcaccgacccctcccaggacttcatgtatgttggtgtaaagttgtcagaggttcag
aacgaccagcaggacatcatcttttactacaccgagccggattcggaaaagtcttacgag
gcggccaggttctccgtgccatccatgctgaacacctggacgaggttttccatcagtatt
ctcaatgaaaaggcatcgctgtacttcaagtgtgactcggacccacaagtggtcaacttc
gagcggtccccagacgacatggacctggatgctggggccggagtgtttgttggtcatgcc
agtagagcagatcctgataagtttctgggtgtaatcggggatctcagggtgttgaaagac
cccggggcagctcagcgtcactgcgaggaagatgaggatgactatgatatgacatcaggt
gatggaccaagtggctatggggagagcgaaacaacatcagtccaggttacacctccatcc
tctcgaccaatccagcagccaccggtgacctctgtaatacagcagacaggctctgttgaa
ttatctcgccgaatttctggctcacatggtgattctcgccaaacatctggttcatacggt
gattctcgacaaactggttcacacggtggttctcgaaaaacatctggttcatacggtgat
tctcagcaagctggttcacacggtgattctcatcaaacatctggttcatacggtgattct
cggcaagctggttcacacggtggttctcgaaaaaagtctggttcatacggtgattctcga
caagctggttcacacggtggttctcgaaaaaagtctggttcatacggtgattctcgacaa
actgtttcacatggtggttctcgacaaactggctcagacagtgattctcgacaaactggt
tcacacagtgattctcgacaaacatctggtgatactggaaaaacccacaccttagttgat
attagcaagcaaattttagtgtcacatgatgtttctagacaagcttcaagcacagttgac
cactctctgagagcttcaggctcagctgatgatggcttgcggtattctgtggagtccaga
ctcggtcctgcaggtacagcaggttctgttggtgcaaaaggagataaaggtgacagagga
gagaagggggccaaaggtgaccggggccttgtgggaccaaagggtgattcggggtctgcc
tctgtgtctggtggaggatcaaagggagagaagggcgaaataggagaaaaaggcatgaag
ggcggtcctggttttggttatcctggatcaaagggagaccgtggccctcctggaccccaa
gggcctcctggtccaccagggcccagtgcagaggtagaggtgagaggtgatgggtcagta
gtggagagggtgacgggaccaagaggaccacctgggccaccaggacccccgggacctacc
ggaactgatggggaaccgggtgaccctggtgaagatgggaagacgggccctgttggacct
cctggttttccaggaactccggggaatacaggacctaaaggagagaaaggtgaccgaggt
gatggtaatccaggaccccgtgggcctccagggcctcctggccctccaggacccccaact
cgctctgacagacccacatttgtggacatggagggttctggttttgatgctgagaatatg
cggggaccgccaggtttgcaaggtccacctggtccacccggcctccccggaccccctggc
cccgaatctgcagcgtctggtggtttcgggcctcctggtccacccggtcaaaatggtgct
ccaggtcaaccgggacttccaggtactccaggtgctgatggaaaatcaggtttacctgga
ccaaaaggagaaaagggtgacgccggtgatctgggtttacctggacctctgggagagaag
ggtgcccaaggtgttcctggtacccctggtcttccaggagagagtggacttgctgggctt
ccaggaccaatgggacccgttggaccaccgggaccacctggtcctcctggcccaagttat
cgtgttggttttgatgatatggaaggctctgcttttgaattcggttcaatttctggtgta
agaggacctacaggagtgcggggacctcctggtctgccaggacaaccaggtaagcctggt
tttccaggacttcctggtgagaaaggcagcgaagggcctcagggaattgatggacggcct
gggttggatggctttcctggaccacagggaccaaaggggttcaaaggagaccaaggcgaa
agaggtgaacctggtcgagatgggaatggtcttcctggtccacctggtcctccaggacca
cctggccagattgtttatcggaatagtgaacattatgatgcaactggagaagcagggcct
cagggagggtccggtcgtccaggtcaagcaggtttccctggcccaatgggaccgaaaggt
gacagaggtgaacctggagcaccaggttacggcattaagggagagaaaggagaacctgga
tatgttctcggacctgatggaaacccactttaccctggtggattggggggcattggcgag
agaggaattcctggaccggttggacctcctggaccagttggacctccaggtccgaagggt
gaatttggaatgccaggcagacccggccgtccaggtgtgaatggttataaaggtgaaaaa
ggagatccaggttcaggttctggatatggctatccgggtcaacctggtcctccaggacct
cccggtccccctggacccgctgcacctttggatagattcagatatgaagattttgttaga
cagtatacagctacaaaaggagagaaaggagaacagggtcttcctggcgtacctgggacc
ccaggttttacatctgatattgacatctatactcttaagaatgagatgaaaggagaacgt
ggcgagcctggtccaagaggagagaaaggagaaccaggtggtggattttatgaccctcgg
tttggagctatagcagggccaccaggaaaccctggacttcctggacctaaaggagactct
atcacaggcccacctggacctcagggcccacctggaccacctggggttggttacgatggg
cgtccaggaaacccaggacctccaggaccccccggtcctccagggtcgccatcattgcca
gggccctacagaccatcactcagtattcccggacccccaggtccgccaggccctcctgga
atccccggacatggaactggggtgactgtgctcaggtcttatgacatcatgctcgcgaca
gcacgcagacaaacagaaggagccctcatatatattatggacagaagtgacctttacctc
agagttcaaaatggagtcagacaagtgatgcttggagattataaacccttctatgtagat
ctggataatgaggtggcagcagttgagccaccccccgttgtcccgtattcccaggaccac
acagccaacaacggagcagagcagatttctccaccacaccagcctgttgatttgccgagg
gagtcagagaacagaaacccgagtccacctgaaaccttctacccagaaccgcaatatccc
cctctgcccgaccctagatacccacctaacaccgacagcaggtacgattccggccaatca
cctatcaggtaccctgaaagataccccgtgactcctcctcgtcgtcccagcccgcccgtc
aaccaaccggaaggccacacgcacacatctggacctgggttgcatcttattgctctaaac
tctccacaagtgggcaacatgagaggcattcgtggggcggatttcatgtgcttccagcag
gctcgggccgtgggtctgaagggaacattcagagcattcctttcctccaaactccaggat
ctctacagcatcgtccgcagatctgaccgagatacgctaccaattgttaatcttaaggat
caagtgctgttcagaagctgggagtctctcttcagtgattcagagagcagaatgaaggac
ggtgcttccatttactcatttgatggtagagatgtcctgagggacagtgcctggccagag
aagatgatctggcacgggtctaatggcaagggtcaccggcagacggataactactgcgag
acatggaggactggagaccgagcggtgacaggcttgtcctcatctctgcagacgggtcaa
ctccttcatcagacacccagcagctgttccagttcctacatcgtcctctgcatcgagaac
agctacatgtcgcagttcaagaaataa |
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