KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129451749
Entry
129451749         CDS       T09481                                 
Symbol
col4a1
Name
(RefSeq) uncharacterized protein col4a1
  KO
K06237  collagen type IV alpha
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04382  Cornified envelope formation
manu04510  Focal adhesion
manu04512  ECM-receptor interaction
manu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:manu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129451749 (col4a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129451749 (col4a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129451749 (col4a1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    129451749 (col4a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:manu04147]
    129451749 (col4a1)
   00536 Glycosaminoglycan binding proteins [BR:manu00536]
    129451749 (col4a1)
Exosome [BR:manu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   129451749 (col4a1)
Glycosaminoglycan binding proteins [BR:manu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   129451749 (col4a1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 129451749
NCBI-ProteinID: XP_055071149
LinkDB
Position
17:11928146..12029744
AA seq 1641 aa
MRLPWSALFLLTVVFSIDKSTAKGGCTGSKCGGSCDCSGVKGSKGERGLPGLPGLVGFPG
LQGHEGPIGPMGPKGDGGEPGAPGLKGNRGPSGVAGFPGRPGIPGIPGLEGPPGSSGIPG
CNGTKGERGFDGPPGLPGRDGSPGNPGLQGEKGDPGGIIGGPIPLKGDRGFQGPPGSSGP
PGSPGTPGRTGPTGPMGPPGRAGYPGQKGEPGDKLAFQGEKGDKGARGLMGPPGPPGRLE
EVEGSSIIQYVPGPPGDRGSKGDKGETTSCLPYLAGIKGEQGPPGPIGKPGKDGLNGEKG
ERGSPGDRGYDGFQGAKGEPGPPGYGEGLPGPPGFPGPPGAQGERGYPGERGYPGPPGRN
IEGPPGLPGLPGEIGQKGDKGADGQSLRGFPGDDGPPGPPGPPGEINRECNIEKGAQGPP
GPIGLQGEVGQKGDRGDTCTACDGQVVPGLPGPPGPKGQQGFPGTAGSKGEKGVAGPVGP
AGNPGQDGFQGLMGAPGAQGEPGDIYVAPGLKGDKGFPGKTGDRGFPGADGLPGINGNPG
QPGPKGEPAREGIKGERGPVGDLGRTGPPGERGPPGFPGVGRPGEPGEKGTAGLPGVPGR
QGLPGPKGEAGRVISLPGPQGAPGPRGESGRPGIQGDRGLPGERGVPGFPGEKGDSGQPG
IGSPGPPGPKGYSGTPGAAGLPGEPGRPGQDGFPGRAGTPGPKGEPGRGLPGPKGSTGQQ
GAPGFPGEKGNTGMPGVPGVEGKTGSPGPQGVKGESGPPGVRGSAGPPGPPGLGEPGPTG
PMGPPGDPGPFGQTGIKGEKGIQGQPGREMPGPQGNQGSPGVPGIPGPKGFPGQTGLPGK
DGFPGERGPKGEMGIMGMTGPPGPPGFIGNPGEPGPRGDPGLIGPRGEYGVEGIKGERGE
QGLQGPPGNISEVDMEHMKGDKGDIGDRGDPGPAGEKGYPGTPGDPGAAGKDGMPGLPGQ
PGVKGDPGLPGFPGRIGDPGETGSRGDMGEPGPMGPKGTKGTAGITGHPGFKGSDGLKGD
RGDPGEAGVGIPGPPGQKGNIGDPGFPGEPGQKGEKGTIGTPGVTGSQGPKGDPGLAGYP
GNPGRPGEKGVSGLPGSPGDPGFPGRAGEPGLQGPPGPQGERGQPGKDGIPGSIGEKGVS
GLPGTGLPGSRGEPGSKGDKGTPGIPGVPGSSGIPGTKGDKGLPGYPGDQGRPGERGFPG
TPMEGPKGDRGSQGESGEKGAIGEPGPPGIPGNFGAKGDKGDVGFPGPRGSQGYKGDKGF
TGIPGEAGLPGINGPKGEMGPQGVPGFPGAKGGLGVIGPKGESGDRGFPGLKGNEGPPGP
PGPHTFVKGDPGLSGPPGIQGPVGPQGFPGMKGEQGVMGSPGLKGADGTPGYNGHPGAKG
EPGPTGPSGPRGYPGPPGPDGIPGRLGPPGPSSMDHGFLVTRHSQNVDVPQCPDGTTLIY
DGYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEP
MPMSMAPITGQSIKPFISRCSVCEAPAMVIAVHSQTIMIPPCPDGWASMWIGYSFVMHTS
AGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIDDSEMFTKPIPT
TLKAGNLRTHISRCQVCMKRV
NT seq 4926 nt   +upstreamnt  +downstreamnt
atgcggcttccgtggagcgctctttttcttctgacagtcgtattcagcattgacaaaagt
actgctaagggaggatgcacaggttctaaatgtgggggttcatgtgactgcagtggtgtt
aaggggtcaaagggtgagaggggactcccgggtttgcctggacttgtgggattccctgga
ttgcaaggtcatgagggtcctatagggccgatgggaccaaagggagatggaggagagcca
ggggctccaggactgaaaggaaacagaggcccatctggtgtggctggtttcccaggtcgt
ccaggtattccaggtattccaggtctagaaggaccaccaggatcttcaggaatcccaggg
tgcaatggaacaaagggggagcgtggttttgatggacctccaggtcttcctggacgggat
ggatcaccaggtaatccaggtttgcagggagagaagggagacccaggtggtataattggt
ggacccatcccactgaaaggagacaggggattccaaggaccaccgggatcatctggacca
cctggttctcccggaacaccaggtcgaactggcccaactggacctatgggacctcctgga
agggctggttatcctggtcaaaagggagagccgggtgacaagctggcatttcaaggcgag
aaaggagacaagggagcaagaggtttgatgggtccccctggtccacctggaagactggag
gaagttgaaggctcatcaataatacagtatgttcctggaccaccgggtgacagaggctct
aaaggagataaaggagaaacaacttcgtgtttaccatatctagctggaatcaaaggtgaa
caaggaccaccaggaccaattggaaagccagggaaagatggactaaatggagaaaaggga
gaaaggggttcacctggtgatcgtgggtatgacggttttcagggtgccaaaggagaacca
ggaccaccaggttatggtgagggtcttcctgggccacctggttttcctggtccccctgga
gcacaaggagaaagaggttaccccggggaacgtggatatcctggtcccccaggcagaaat
attgagggccctcctggactacctggcttacctggagaaattggccaaaagggagataaa
ggagctgatgggcagtctcttagaggatttcctggagatgatggtcctcctgggccacct
ggtcctcctggagagatcaacagagaatgtaatatcgaaaaaggagctcaaggccctcct
ggacctataggtttgcagggggaggtggggcaaaaaggtgatcgaggtgacacgtgcact
gcttgcgatggtcaggtggtccccggattgcctggtcccccggggccaaagggtcaacaa
ggttttcctggaacagcaggaagtaaaggagagaagggtgttgccggacctgttgggcct
gctggaaatcccggtcaggatggctttcaaggtttaatgggtgcccctggtgctcagggt
gagcctggtgatatctatgtggcaccagggctgaaaggagacaagggttttcctggtaaa
acaggagatagaggatttccaggtgctgatggtctcccaggaataaatggcaacccaggg
caacctggacccaaaggagagcctgctagagaaggtattaagggtgaacgcggccctgtt
ggagatctaggtagaactggccccccaggcgagagaggtcccccagggttcccaggagta
ggtcgaccaggtgaacctggtgaaaagggcactgcagggttgccaggtgtaccaggacgg
caaggattaccaggacctaaaggtgaagctggtagagttatatctttacctgggcctcag
ggtgccccaggacctcgtggggagagtggcagacctggtattcaaggagacagaggtctt
ccaggtgaacgtggggttccaggatttcctggagaaaaaggtgattctgggcaaccagga
attggatctcctggacccccagggccaaaaggatactctgggactccaggtgcagctggc
cttccaggagagcctggtcgtccaggtcaggatggctttcccggtcgtgcaggaacaccc
gggccgaaaggtgaacctggtaggggtcttcctggccctaaaggctccacaggtcagcaa
ggagctccaggatttccaggagagaagggtaatactggaatgccaggtgttcctggggtt
gaaggaaaaacagggtcacctggccctcagggagttaaaggtgaatctgggccaccagga
gttcgtggttcggcaggaccaccaggtcctccagggcttggggaacctggaccaactgga
ccaatggggccacctggagaccctggaccttttggtcaaacaggtataaagggtgagaaa
ggaattcaaggacaacctggccgtgaaatgccaggacctcaaggaaatcagggtagccct
ggtgtcccagggataccaggccctaaggggtttcctggacaaacagggttgcctggtaaa
gacggctttcctggtgaacgaggaccaaaaggagaaatgggaattatggggatgacagga
cctcccggacctccaggttttattggaaaccctggagaacctggaccaagaggtgaccca
ggcttaattggacccaggggagagtatggtgtggaggggattaagggtgagagaggagag
cagggtcttcaggggccacctggtaacatcagtgaggtggacatggagcacatgaaaggg
gataaaggagacattggagacagaggtgatcctggtcctgctggagaaaagggatatcct
ggaacacctggggaccctggagcggcaggaaaggatggaatgccaggattacccggacaa
ccaggtgtgaaaggtgaccctggacttcctggatttccaggacgtattggagaccctgga
gagacaggctcaagaggagacatgggagaaccaggtccaatggggccaaaaggcactaaa
ggtactgctggaataacaggacaccctggatttaagggctctgatggacttaaaggagat
agaggagacccgggtgaggcaggagtaggaatccctggtccccctggacaaaagggaaat
ataggtgaccctggttttcctggtgaacctggacaaaagggagagaaaggcacaatagga
actccaggtgttactggtagtcaaggacctaaaggagacccaggattggctggttaccca
ggcaacccagggaggccaggtgagaagggtgtcagtgggttgccaggttctccaggagat
cctggatttccaggacgtgcaggtgagcctggtctacagggtcctccgggtccacaagga
gaaagaggtcaaccaggaaaagatggcattcctggatcaattggagagaagggtgtatct
ggtcttcctgggacgggactccctggatcccgtggtgaacctggcagcaaaggtgataaa
ggcacccctggtattcctggcgttcctgggagttcaggtattcctggaaccaaaggagat
aagggtctgccaggctacccaggggatcaaggtcgccctggagaaagaggatttccagga
acacccatggagggacctaaaggggacagaggaagtcagggggagtcaggagaaaaaggt
gcaataggtgaaccaggcccacctggtattccaggcaattttggagctaaaggagataaa
ggagatgtgggcttcccaggtccacgaggctcccaaggttataaaggagacaaaggtttt
actggcattcctggtgaggctggattgcctggtattaatgggccaaagggtgagatggga
ccacagggcgttcccggtttccctggtgcaaaggggggtttaggagtgatcggtccaaaa
ggtgaaagtggggacagaggatttccaggacttaaaggcaatgaaggcccccctggaccc
cctgggccacacacatttgtaaagggagatcctggtctttctggcccgccaggtatccaa
ggtccagttggaccccaaggcttccccggaatgaaaggagaacagggtgtgatgggttca
ccgggtttaaaaggagctgatgggacacctggctataatggacatccgggagccaaagga
gagcccggaccaactggaccctctggtcccagaggttaccctggacctccagggcctgac
ggtattccaggtcgccttggcccccctggaccttcctcgatggaccacggcttcctggta
actcgtcacagtcagaatgttgacgttccacaatgtccagatggaaccacgctgatatac
gatggatactccctcctttatgtccagggcaacgagagatcacatgggcaagacctaggc
acagctggcagctgcctaaggaaattcagccctatgcctttccttttctgcaacatcaac
aacgtatgcaactttgcatctcgcaatgactattcctactggctcacctctccagagcca
atgccaatgagcatggctcccattaccggtcagagcattaaacccttcatcagcagatgt
tcagtatgtgaagctcctgctatggtgatagccgtacacagtcagaccatcatgatccca
ccctgccctgacggttgggcttccatgtggatcggatactcttttgtcatgcacaccagt
gctggtgctgagggttcgggtcaggctttagcctctcctggctcttgtttggaagagttc
cgctctgctcccttcattgagtgtcacggccgtggcacctgcaactactacgctaattca
tacagcttctggttagccaccatagatgacagcgaaatgtttacgaaacctatcccaaca
acactaaaagctgggaatctacggactcacatcagcaggtgtcaggtgtgcatgaagaga
gtatag

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