| Entry |
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| Symbol |
prpf40a
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| Name |
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
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| KO |
| K12821 | pre-mRNA-processing factor 40 |
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| Organism |
manu Misgurnus anguillicaudatus (oriental weatherfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:manu00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129451876 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:manu03041]
129451876 (prpf40a)
Spliceosome [BR:manu03041]
Complex A
U1 snRNP components
U1 related factors
129451876 (prpf40a)
Complex B
129451876 (prpf40a)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
17:2718155..2745953
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| AA seq |
879 aa
MSSTDASSGPSQAPPFPGVPPSGIPPPFMGPPGIPPHFPPMGMPPMGQRPPSMTPMPPGI
MPPMMPPMGAPPMGQIPSMMPPMMPGMMLPPRMPAASVQPTGPPGVSPVEPAAPAAPGTT
STTSTESSPDEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCPW
KEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTADIVAPGTTTPALTTPIE
SSVAMAAVAETETVMATVTTEEQPALVPVQAAEVSNDVPVNSTEETPSVETLPSNDTSKE
ERPELVKKVYKWNTKEEAKQAFKELLKEKGVSSNASWEQAMKLIINDPRYSALPKLSEKK
QAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFNDLEVWSC
VPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLL
DNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEDEKQKTLLRERRRQRKNREAFQKFL
DELHDHGQLHSMSAWMEMYPTVSADIRFNNMLGQPGSTPLDLFKFYVEDLKARYHDEKRI
IKDILKDKGFLVEINTSFEDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKE
EARKMKRKEAAFKSMLKQATPPLEPETTWEGVRERFLKEPAFEDVTLESERKRIFKDFMH
VLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDEYHSKKKKRSTSKSPSEHSSS
GESERSYKKSKKHKKKGKKRRHKSASPESDGDKERKGREKEKDKENDKSRGKPHGESKQK
SPKRKSTKEEARWDTSGSELSEGELEKRRRTLLEQLDAP |
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| NT seq |
2640 nt +upstreamnt +downstreamnt
atgtcctcgactgatgctagtagtggccccagtcaagcaccaccttttcctggtgttcca
ccttcaggaataccaccaccctttatgggaccaccaggaatcccaccgcacttccctccg
atgggaatgccgcccatgggccagaggccacccagcatgacccctatgcctccaggaata
atgccccctatgatgcccccaatgggtgccccgccaatgggacagataccttccatgatg
ccaccaatgatgccagggatgatgttgcccccccgtatgccagccgcatcagtacaacct
acaggaccgcctggtgtgagcccagtggagcctgcagctccagctgctcctggaactacg
agcaccacatcaactgagtcttcaccggatgaacagccgaaaaagaagtcagtgtggact
gagcacaaatcactggatggaaaaacatattactacaacacagaaaccaaacaatccacc
tgggagaaacctgatgagctcaaatcacctgcagagcaaatgttgtccaagtgcccttgg
aaggagtataagtcggatacgggaaagccctactactacaactcacagaccaaagagtcc
cgctggaccaaacccaaagaactggaggatctagaagccatgatcaaagcagaggagaat
gggacggctgacatcgtggctcctgggaccaccacccctgctcttacaactccgatcgag
tcttctgttgccatggctgcggttgctgagacagagactgtcatggcgacggtcaccaca
gaggagcagccagctctcgtgcctgtgcaggctgctgaggttagcaatgatgtccctgtg
aactccactgaggaaacgcccagcgtagagacactacccagtaatgacacatctaaggag
gagagacctgagctggtgaagaaagtttacaagtggaacacaaaagaggaggcaaagcag
gcctttaaagaacttctgaaagaaaagggggtttcctccaatgcatcgtgggagcaggca
atgaagctcatcattaatgaccctcgttacagtgctctgcccaagctaagtgaaaagaaa
caagcatttaatgcttataaagtccagacagagaaagaggagaaagaagaagccagaatc
aaatacaaggagtctaaagagaccttccagcgctttcttgagaaccatgagaagatgaca
tcaaccaccagatacaaaaaagcggagcagatgtttaatgacctggaggtgtggtcatgt
gtcccagagagagacagactggagatctatgaggatgtgcttttttatctggccaagaaa
gagaaggaacaagccaagcagttaaggaagaggaactgggaggcacttaagaacatatta
gacaatatggccaatgtcacgtacagaaccacctggtctgaggctcagcagtacctacta
gacaaccccacttttgctgaggatgaggagctacagaacatggataaggaggatgccctg
atctgttttgaggaacacattcgtgctcttgagaaagaggaggaagacgagaaacagaaa
actctactgcgagagagacgcagacagcgcaagaacagagaagccttccagaaatttttg
gatgagcttcatgatcacgggcagctgcactccatgtcagcctggatggagatgtacccg
actgtcagcgctgatatccgcttcaacaacatgttgggccagccaggttccacccctctg
gacttatttaaattttacgtggaggatctgaaagctcgttaccatgatgagaagagaatt
attaaagacatcctaaaggataaaggctttttggtagagatcaacacaagctttgaagat
ttcggctcagtgatcagctctgataaacgtgctaccacactggacgcaggaaacatcaaa
ctggcattcaacagcttacttgagaaggcagaagcacgggagagggagagagaaaaagag
gaggcaagaaagatgaagaggaaagaggcggcgtttaagagcatgctgaaacaggccaca
ccccctctggagccagaaaccacgtgggaaggagtacgagaacggttcctgaaggagcct
gcgtttgaggatgtcacgctggagtccgagaggaagaggatatttaaagacttcatgcat
gttttagagcacgagtgtcaacatcatcactctaaaactaaaaaacactcaaagaaatcc
aagaaacaccacagaaaacgctccagatctcgatcgggttcggagtctgaggatgacgag
taccactccaagaagaagaaacgttcaacatctaaatctccatctgagcactcgtcctct
ggagaatctgagagaagttacaagaaatctaagaagcacaagaagaagggaaagaaaaga
cgacacaaatccgcctctccagagtctgatggagataaagaacggaagggacgagaaaaa
gagaaggacaaagaaaatgacaagtccagagggaagccgcatggagaatccaaacagaaa
tctcccaaaagaaagagcacaaaagaggaggcaagatgggatacatctggcagtgaacta
agtgaaggagagctagagaagaggagacgtactcttttagagcagctggacgcaccttag |
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