Misgurnus anguillicaudatus (oriental weatherfish): 129452118
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Entry
129452118 CDS
T09481
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129452118 (sox1a)
Transcription factors [BR:
manu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129452118 (sox1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129452118
NCBI-ProteinID:
XP_055071773
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All DBs
Position
17:19058934..19061616
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AA seq
342 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNPGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAGGGAGVGLGVGMSPVGVGQRLESPGGHGGSTSAGYAHMNGWANGTYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGSHHHHAHHHHPHNPQPMHRYDMTALQYSPISNSQS
YMSASPSGYGGISYTQHQNSSVASSATIGTLSSLVKSEPNISPPVTTHSRGPCPGDLREM
ISMYLPTGETGDPSVQSRLHALPQHYQSTTAGVNGTVPLTHI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggaccttcattcccccggaccccaaaccaacacgaat
ccggggcagacaggtccaaattcggggagcaaagccaaccaagaccgcgtaaaaagaccc
atgaatgcttttatggtgtggtcccggggccagcgcagaaaaatggcacaagagaaccct
aaaatgcataactctgaaattagcaaaagactcggtgctgagtggaaagtgatgtcagag
gctgaaaagcggccctttattgacgaggcaaaacgattgcgagccatgcacatgaaagaa
cacccggattacaaatacagaccgaggcgcaaaaccaagaccctgcttaaaaaggacaag
tactcgttggccggcggcttgctcggcggtgcgggtggtggtgcaggagttggtctcggg
gtcgggatgagtcctgtgggggtcggccagaggttggagagtcctgggggtcacggaggc
tcgaccagcgccggctacgcgcacatgaacggctgggcaaatggcacatactctggccag
gttgccgccgccgcagcagcggctgcaatgatgcaggaggcgcaactcgcttatagccag
catccaggtagtgggtcgcatcatcaccacgctcatcatcatcacccgcataacccgcag
cccatgcatcgctacgacatgactgctctacagtacagccccatctcaaactcccagagc
tacatgagcgcatctccgtctggctacggtgggatatcgtacacgcagcatcaaaactcc
agcgttgcatcttccgccaccatcggtacgctgagctcactcgtcaagtccgaaccgaat
ataagccctccggttacaacacattcccgtggaccctgtcccggagacttgagagaaatg
ataagcatgtatttaccgaccggggagaccggtgatccgtctgttcaaagcagactgcat
gccttaccgcagcactatcagagcacgactgccggagtgaacggaactgtcccattgacg
catatttga
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