Misgurnus anguillicaudatus (oriental weatherfish): 129452161
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Entry
129452161 CDS
T09481
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129452161 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129452161 (xrcc5)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
129452161 (xrcc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
129452161
NCBI-ProteinID:
XP_055071821
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Position
17:39583031..39596538
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AA seq
724 aa
AA seq
DB search
MARASKSALVLCMDVGFSMSNSEPGQEPPFEQAKKVIQKFVQRQVFDENKDEVALVLFGT
DETKNRLAKDGQYQNITVHRQLMMPDFELLEEIQNELQPGGQQADWLDALVVCMDLLQNE
TMGKKYTRLNIVLLTDLNVQSSEDQLDVIINSLKKAGITLQFFLPFPVDEDGGDGGRGGS
GSASPPPRPGKGLSGQQTQGLEMVRNIMTALDEDGLEEVYTFSDALEKLSIFKCIARRPM
AWPCQLTIGSSITIRIVGYKAVTEEKVKKSWAVVDAESHQKDDVRRETVYCLNDDDETEV
QKEDTIQGYRYGSDIVPFSKVDEDQMKYKSDGKCFSVLGFTKQELINRHQFMGSQVVKVF
APRDDEHAAVALSALIRALDALKMAAVVRYAYDRRSNPQVGAAFPCIKEKYECLLYVQLP
YMEDLRQFTFPMLESNKKFKPSESQLSAVDGLIDSMMLVEEDEDGSTVDLLKTNHIPNPQ
FQRLYQCLHHRGVRPDDPLPQIEPWLQRVLERPQAVSARCQAPLQDVKTKFPLKEVVKRK
EAKTSADVFGVSTEEPDAKRVKVSEETEFNLAEITEGRVTSVGSVNPARDFHALIRQKSL
PFDQACQELIRRIEQLLGNRSPEYYMKSITCIQAFRTESITSGNAELFNSYMQSLKRSLP
DRNLQEFWDLLVQDGLTLISKDEVDNSTFSKQDANQFLALEKVEVQVSSAQDDTGDVDDL
LDMM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcatcgaagtcagcattggtactgtgcatggatgtgggtttctccatgagc
aactcagaacctggccaggaaccgcccttcgaacaggccaaaaaagtcatccaaaaattt
gtccagcgacaggtgtttgatgagaataaggatgaagtggctctggtgctgtttggtact
gatgaaaccaagaaccgtctggctaaagatggtcagtatcagaacatcactgtccatcga
caactgatgatgcctgattttgagctgctggaggagattcagaatgaacttcagcctggt
ggccaacaagcagattggcttgatgctcttgttgtttgcatggatctcctgcagaacgaa
accatgggtaaaaaatatacacgtctgaacatcgtgctgttgacggatctgaatgtgcag
agctctgaagaccagcttgatgttattattaacagtctgaagaaagcaggaattactctg
cagttttttttgccgttccctgtggatgaagacggaggtgatggaggtaggggtgggtct
gggtcagcgtcgcctccaccccgcccaggaaaaggcttaagtggacagcagacccaaggc
ctggaaatggtcagaaacatcatgaccgctctggatgaggatggtctggaagaagtttac
acttttagtgatgctctggagaagctgtccatctttaagtgtatcgcccggaggccgatg
gcctggccctgtcagctcactatcggcagctcgatcaccatccgtatcgtaggatacaaa
gcggtgacggaggagaaggtgaagaagtcatgggctgtggttgatgctgagagtcaccag
aaagatgatgtcaggagagagacggtttactgcctgaatgacgatgatgaaactgaagtg
cagaaggaggacactattcaaggttaccgttacggcagtgacattgttcccttttctaaa
gtggacgaggaccagatgaaatacaaatctgatggcaaatgtttttcagttcttggtttt
actaaacaggagctgattaatcgtcatcagtttatgggaagtcaggttgttaaagttttt
gcgcccagagatgatgagcatgcggctgtagctctctctgctctgattcgtgcactcgat
gctctaaagatggcggctgtagtgcgttacgcatatgatcgccgtagcaaccctcaagtg
ggcgcggcctttccttgcattaaggaaaaatatgaatgtctattgtacgttcagctgccg
tatatggaagacctcagacagtttacgttcccaatgttagaaagcaacaagaagtttaaa
ccctcagagtcgcagctctcggcagtggacgggctaatcgactccatgatgctggttgag
gaagatgaagatggaagtacagtcgacctgcttaaaaccaaccacattccaaacccacag
ttccagagactttaccagtgcctacatcaccgcggcgtgagacctgatgatcctctgcca
cagattgaaccctggcttcagagggttctggagcgaccacaggccgtgtccgctcgctgt
caggccccgctgcaagacgtcaagacaaaattccctctgaaagaagtggtgaaacggaaa
gaggcgaagaccagtgcagatgtgtttggggtcagcactgaagagcccgatgcaaaaaga
gttaaagtcagtgaggagactgaatttaacctggcagagatcacagaaggacgcgtcaca
tcggttggtagcgtgaatccagcgcgagatttccacgcattgataagacaaaagagcctt
ccctttgatcaggcgtgtcaggagctgatccgcaggattgagcagttgctgggcaacagg
agtccagagtactacatgaaaagcatcacctgtatccaggccttcaggacagagtccatc
acgtctggaaacgctgagctattcaacagttacatgcagtccctgaagagaagccttccc
gacaggaacctgcaggaattctgggatctgcttgttcaagatggtctcacgctgatcagc
aaagatgaagtggacaacagcaccttctccaaacaagatgcaaaccagtttctggcattg
gagaaggtggaggtccaggtgtcatccgcgcaggacgacaccggtgatgttgatgatttg
cttgacatgatgtga
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