KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129452634
Entry
129452634         CDS       T09481                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:manu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:manu03036]
    129452634 (kdm4b)
Enzymes [BR:manu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     129452634 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     129452634 (kdm4b)
Chromosome and associated proteins [BR:manu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    129452634 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD 53-BP1_Tudor DUF4537 Saf4_Yju2 Tudor_5 DUF7141
Other DBs
NCBI-GeneID: 129452634
NCBI-ProteinID: XP_055072587
LinkDB
Position
23:complement(28700679..28745451)
AA seq 1112 aa
MDPSLPPDPNPEPEPSPDVTPPADAAQESPVEPSDSIPQSCDELISGPTLEPCPESTPAP
ELTPGSIPASPPAANTYKIMTFRPTMEEFMDFKKYIAYMESQGAHRIGLAKVIPPKEFIP
RRTYETIEDMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYRKLANSKKYCTPQHKDFD
DLERKYWKNLTFVSPIYGADISGSLYDPDIKEWNIAHLDTLLDMVEQECGIVIEGVNTPY
LYFGMWKTTFAWHTEDMDLYSINYLHFGQPKSWYAIPPEHGKRLERLAQGFFPGSSQGCD
AFLRHKMTLISPSILKKYSIPFDRVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLR
WIDYGKMATQCSCRKDMVKISMDVFVRCLQPDRYDLWKQGKDNTVLDHLKPTTLTCPELE
HWRKTRVTYREKLLRRTQAKVKQFRRLKLEEMKVLAEEGIELDMTEYMTKVEEREEQRRK
RKDERMDREALLTLEALEREEQEQAEAALRETGEDEKPDTKDLILENDQQKKRKKKKMKN
PDEISFQEAFEHFTTNDLQNQNGLQISPFTKLKKKVEVKKSRRHPLSKPPMRAPHSIVKQ
EASSDEELYGGLPVGGGVEPDVKKTQDSDLWQNSLPNFVAEKQFNAAMASIKPHCAVCVL
FCPYTQPLKDPAHLSDTPGPASKVGSRSRPLLPEMCFSVGAENTEPLPSNSYNGEDGTSV
LLSCASCSLQVHASCYGVNTDIKQESWMCSRCSVQAWTAACCLCSLRGGALKKTTDDRWV
HVICAVAVPEVRFVNAVEREPVDVTAVPDTRKSLKCVYCHKTTKQTFGACIQCSADNCST
SFHVTCALLAGVVMKPADWPYVVSVTCHKHKQTNQKVKGNSRDVSLGQEVIGKHSNGWFY
RCTITGIGSQSFYEVNFDDGSYCDNVFPENILSHDCLRNGPPDLGELVVVKTLDDQILNA
SFIKEHVHRKYQVEFQDETQLLLKRSEIHSLDQELPKRVLSRLATVNQQQPQAQPSDEPL
AAKRPRLPTPPPTLAAETPELPPELVSAFLPSSITPNTSTAPCLPPATTLPAPSPQPSET
YSHSSSYVAYMESLLNSDFPPEDGEQGGEPMY
NT seq 3339 nt   +upstreamnt  +downstreamnt
atggacccatctttaccccccgacccgaaccctgagcctgaacccagcccagacgtgact
ccaccggccgatgctgctcaggagtcacccgtcgaaccctcggattcaattccacaatca
tgcgatgaactgatttcaggtccgaccctagaaccatgtccagaatcaactccagcacca
gaactgaccccgggatcgatcccagcgtctcctcctgctgcaaacacctacaaaatcatg
accttcagacccaccatggaagagttcatggacttcaagaagtatatcgcttatatggag
tcacaaggagctcaccgcattggcctggcaaaggttattccaccgaaagagttcatacca
cgtcgtacctacgagacgatcgaggacatggtcattcctgcccccatcatgcaggtggtg
acaggccagtcgggactcttcacgcagtacaacatccagaagaagtcgatgacggtcgga
gagtaccgcaaactggccaacagtaaaaaatactgcacccctcaacacaaagactttgac
gacttggagaggaaatactggaaaaatctgacgtttgtgtcgcccatctatggtgctgat
atcagtgggtcgctttatgacccggacatcaaagagtggaacatcgctcatctggacaca
cttctggacatggtggagcaggagtgcgggatcgtcatcgagggcgtcaacacgccctac
ttgtacttcggcatgtggaaaaccacgttcgcctggcacacggaggacatggacctctac
agcatcaactacctgcattttgggcagccaaaatcctggtatgcgattcctcccgagcac
ggcaagagattggagaggctggcacaaggttttttcccgggaagttctcagggctgcgat
gcgttcctccgtcacaaaatgactctcatttctccctccatcctgaagaaatacagcatc
cccttcgacagggtcactcaagaagcgggcgagtttatgatcacgttcccgtacggatat
catgccgggttcaaccatggcttcaactgtgcagagtccaccaactttgcaacgctgcgc
tggatcgactacggcaagatggccacacagtgctcttgccgcaaagacatggtgaagatc
tcgatggacgtgtttgtgcgctgcctgcaacctgaccgctacgatctgtggaaacaagga
aaggacaacacggtcctggaccatctaaaaccgacgaccctcacctgtcctgagctggag
cactggaggaaaaccagagtcacgtacagagagaaactactgcgaaggacgcaggcgaag
gtgaaacagttccgacgtctgaagctggaggagatgaaggtcctggcggaggaggggatt
gagctcgatatgaccgagtacatgacgaaggtggaggagagagaggagcagaggaggaag
aggaaggatgaacggatggaccgcgaggcgctcctgaccctggaggcgctggagagagag
gaacaggaacaggccgaggcggcgctacgggaaacaggtgaagatgaaaaaccagatacc
aaggatcttatattggaaaatgaccagcagaaaaagaggaagaagaagaagatgaagaat
cccgatgagatcagctttcaggaggcgtttgaacatttcactacaaacgaccttcaaaac
caaaatggcctacagataagtcccttcacaaaactaaaaaagaaggtagaggtgaaaaag
agccgacggcatccgctcagcaaaccacccatgagagcaccgcactccatagtcaaacag
gaagcctccagcgatgaggagctgtacggtggactgccagtaggtggaggtgtggaaccg
gatgtcaagaagacgcaagatagcgatctgtggcaaaacagcttgccgaatttcgtagct
gagaaacagttcaacgctgccatggcatctatcaagccacactgcgccgtatgcgtgctc
ttctgtccatacacgcagcctctgaaggatcccgcccatctctcagacacacccgggccg
gcatccaaggtcggttctcgcagtcgtcctctgcttccagagatgtgtttcagtgtgggg
gctgagaacactgaacctctcccatcgaattcctacaacggtgaagatggtaccagcgtc
ctgctgtcctgcgcaagctgcagtctacaagttcatgctagttgttacggcgtcaacacc
gatataaagcaggagagctggatgtgttctcgatgtagcgtgcaggcgtggacggccgcc
tgctgtttgtgcagtttaagaggaggggctttgaagaaaaccacagatgacaggtgggtt
cacgtgatctgtgccgtcgccgttcccgaggttcgattcgtgaatgcagtggagcgagag
ccggtggacgtgaccgctgtcccggacaccaggaagagtctgaagtgcgtgtactgtcac
aagacgaccaaacagaccttcggcgcatgtatccagtgctctgccgacaactgctccacg
tccttccacgtcacctgcgccctcctcgccggggtggtgatgaagcccgccgattggccg
tacgtggtgtcagtgacctgccacaaacacaaacagaccaatcagaaggtcaaaggcaac
tcccgtgatgtgtctctgggtcaggaggtcataggcaagcacagtaacggctggttctat
cgctgtaccatcaccgggatcggttcccagagcttttacgaggtcaattttgatgatggt
tcctactgtgataacgtctttccggaaaacatactgagtcacgactgtctacggaacggt
cctccagatcttggagaacttgtcgtggtcaagacgttagacgaccagatacttaatgca
tcttttattaaggaacacgtccataggaagtaccaggttgagtttcaggatgagacacag
ctcctactgaaacgaagtgagattcactctctggaccaagaactgcccaagagagtcttg
tctcgtctggcaactgtgaaccaacagcaacctcaggcccagccatcagatgaacctctg
gccgcaaagcgtccacgtttgccgacgccgccccccacactagcagccgaaaccccggag
ctacctcctgaattagtctctgctttcctgcccagcagtattactccaaacaccagcact
gccccctgccttcctcctgcaaccacactgcccgccccttcccctcaacccagcgaaacc
tactcgcacagttccagctatgtagcctacatggagtctctcctaaactctgactttccc
ccagaggacggcgaacaaggcggcgagccgatgtattaa

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