Misgurnus anguillicaudatus (oriental weatherfish): 129452720
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Entry
129452720 CDS
T09481
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129452720 (shoc2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_At5g56370
LRR_5
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
129452720
NCBI-ProteinID:
XP_073718229
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All DBs
Position
23:complement(6474027..6489660)
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AA seq
561 aa
AA seq
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MSSTLGKDKDSKEREPKAEGKSKTKGKDAKDGKKDTSGASPAVAFTLDSTIKRPNPPPST
RKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPE
LGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVASLTTLYLRF
NRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT
QITNLDLQHNELLDLPESIGNLSSINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISV
LPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL
SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEVLILSNNLLKKLP
HGIGSLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL
GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIV
AGGPSFIIQFLKMQGPYRAMV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcactttgggcaaagataaagactctaaggagagggaacccaaagccgaaggg
aaatccaaaaccaaagggaaagatgccaaagatggtaagaaggacacaagcggcgcttcg
cccgccgtggccttcaccttggatagcacgataaagcgtcccaacccgccgcccagcacc
cgcaaaaaatccagcaatgcggaggtcatcaaggagctgaacaagtgccgcgaggagaac
tcgatgcgtctggacctgtccaagagatccatccatctgttgccctcttccatcaaggag
ctaacccagctaaccgagctgtacctgtacagcaacaaactacagagtctcccgccagag
ttgggctgtctgtcagggctggtgacgctagcgctcagcgagaactctctcaccagcctg
cccgactctctggacaacctaaagaagttgcgtatgcttgacctacgacataacaaactg
cgggagattcctgccgtggtctaccgcgtcgcctctctcaccacgctctacctgcgcttt
aaccgcatcaccaccgtagagaaagacatcaagaacctgtccaaacttaccatgctcagc
atccgagagaacaagattaaacagctgcccgcggagatcggtgaactatgtaacctgatt
acgctggatgtagcacacaaccagttagagcaccttcctaaagagatcggcaattgcaca
cagatcacaaacctcgacctgcagcacaatgaacttcttgacctacctgagtctataggt
aacctgtcaagtataaaccggttgggcctgaggtacaaccgtctatccgcaatccctcga
tccttagcaaagtgccgagaactggaggagcttaaccttgaaaacaacaacatctctgtg
ttaccagaggggcttctctcaagcttggtcaacctgacgagtctgacgctggcacgaaac
tgtttccagtcttatccagtgggcggcccttcccagttctccaccatctactctctcaac
atggagcacaaccgtatcaacaaaatcccttttggcatcttctctagagcaaaagtgctc
agcaagctcaacatgaaggacaaccagctaacatctcttccactggattttgggacgtgg
accagcatggtggagctgaacctggcaacaaaccagctcaccaagattccagaggatatc
tgcggccttgtgtctttagaggttctcatattgtccaacaatctcttgaaaaagttgcct
catgggattgggagtttacggaaactacgagagcttgacctggaggagaacaaactggag
tctctcccaaatgagattgcctaccttaaggatctacagaaacttgtgttgaccaataat
cagctgaccactttgccaagagggatcggtcatttgaccaacctgacatacctgggcttg
ggagagaacctactgcagcacctacctgaggaaatcggtacactggagaaccttgaggac
ctgtacctaaacgacaaccctaacctgcacagtctgccatttgagctggccctatgcagt
aagctgtccatcatgagcatagagaactgcccactcagccacctcccaccccagattgtc
gctgggggcccttcattcatcatccagttcctcaagatgcagggaccctaccgtgccatg
gtctga
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