KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129453118
Entry
129453118         CDS       T09481                                 
Symbol
polr2eb
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03020  RNA polymerase
manu03420  Nucleotide excision repair
manu04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129453118 (polr2eb)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129453118 (polr2eb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:manu03021]
    129453118 (polr2eb)
   03400 DNA repair and recombination proteins [BR:manu03400]
    129453118 (polr2eb)
Transcription machinery [BR:manu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129453118 (polr2eb)
  RNA polymerase III system
   RNA polymerase III
     129453118 (polr2eb)
  RNA polymerase I system
   RNA polymerase I
     129453118 (polr2eb)
DNA repair and recombination proteins [BR:manu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129453118 (polr2eb)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NYD-SP12_N NA-iREase1
Other DBs
NCBI-GeneID: 129453118
NCBI-ProteinID: XP_055073152
LinkDB
Position
11:complement(5940403..5946891)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaagaagagacttaccgattatggaaaattagaaaaactataatgcagcta
tgtcacgatcgcggatatttagtaacgcaagatgaattggatcagacccttgatgagttt
aaaagtcagtttggagacaaacccagtgagggtcgaccgcgacgaaccgacctcactgtc
ctggtcgcccacaacgacgatccaaccgaccagatgtttgttttctttcctgaggaaccc
aaagttggcatcaaaaccataaagatgtactgccaacgtatgcaagaggagaacatcaca
cgagccattattgtagtacagatgggcatgaccccttcagccaagcagtctctggtagac
atggcaccgaagtacatactcgagcagtttcttcaacaagagcttctgatcaacattact
gaacatgagcttgtgcccgaacacatagtgatgactaaagaggaagtgaccgagctgttg
gcaagatataaactaaaggaaagccagcttcccaggattcaagctggggaccctgtggct
cgatactttggcttgaaaagaggccaggttgttaagattatcagaccaagtgagactgct
ggacggtacatcacgtacagattggtccagtaa

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