Misgurnus anguillicaudatus (oriental weatherfish): 129453158
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Entry
129453158 CDS
T09481
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129453158 (lingo3a)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
129453158 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
LRR_4
Ig_3
ig
LRR_14
Ig_2
LRR_9
LRR_LRWD1
LRRNT
LRR_EndoS
Cupin_1
V-set
Motif
Other DBs
NCBI-GeneID:
129453158
NCBI-ProteinID:
XP_055073224
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All DBs
Position
23:17542768..17616718
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AA seq
604 aa
AA seq
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MADCPHLSLPGLFVLLITASVTRGQSCPQRCDCFQQQRAVMCQNKRLSSIPAGIPVDTRL
LDLSGNSLRWVEYNDLATFSKTEELDLSENLISVLEPNAFSSLLNLKVLRLRANQLKLIP
MGAFSRLTNLTTLDLSENKLVILLDFTFQDLRNLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSISGQSLSYLRGLVTLRLRYLSIASLEEQNFRKLGGLRGLEIDHWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLDLSHNPISVLESWALRDLVRLKE
LHLVGTNLFSVQAYGLGGLQQLRLLNLSNNKLVTLEESSFHSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFDGKSPVCAAPVEVRGKALSTFTDSALFDHFTCQRPKIRNRKLQQLT
AREGQVVSFVCSAEGDPTPVIFWISPQRRRITTKSTGRVIVLPVGTLEIRYAQITDSGTY
ICIASNAGGNDTYFATLTVSGSPLDGALANRTYYVGDLNDTNLNDTRVFLKFTLDLKTIL
VSTAMGCITFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPATSGGQGGARKFN
MKMI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgtccacacctgagcttaccggggctgtttgtgctcctgatcactgcatcc
gtaacacgaggccaaagctgcccgcaacgctgtgactgtttccagcagcaaagggctgtg
atgtgccagaacaagcgtctgagctctattcctgccggtataccggtcgacacacggctg
ttggacttgagcggcaacagtttgcgatgggtggaatacaatgacctggcaaccttctca
aaaacggaggagctagacctgagcgaaaacctcatcagcgtgcttgaacccaatgccttt
tccagtttgctcaatctcaaagtcctccgtcttcgagccaaccagctgaaactcataccc
atgggtgccttttcgcgtctcaccaacctcaccactttggatttaagtgagaataaacta
gttatcctattagacttcaccttccaggatctgaggaacctacgcaatctggaggtcggg
gataatgatttggtgtacatttctaacaaagctttcttgggtctagtcggtcttcgggaa
ctcaccatcgagaggtgcaacttgacttctatatccggacagtctctttcataccttcgc
ggtttggtgacgctacgattacgctacctcagcatcgcttcgttggaagaacagaacttt
cgtaaactgggcggtttgcggggtcttgagatcgaccattggcccttcctcgagtacatt
tctccacacagcttccagggtctcaatctttcttggctctcgattaccaacaccaacatt
tccactgtgcctacgggtgctctccgtaacctcattcacctggccagcctcgatctttct
cacaaccccatctctgttctcgagtcctgggccttgcgcgaccttgtacgtttgaaggaa
ttgcacctagttggtacaaatcttttttcggtgcaggcttatggtcttggaggtttgcag
cagctacgattactcaacctttcaaacaacaaattggttaccctagaggaaagctccttc
cactcggttaacaccttggaaacgttgcgtgtggatggcaaccctttatcttgcgattgc
cgcctactgtggatcctgcagcgtcggaaaactctcaattttgacggaaagtcgccggtt
tgcgctgcacccgtggaagtacgaggaaaagcactcagcaccttcacggactctgcgctg
tttgaccacttcacctgtcagcggccaaaaattcgcaaccggaaactgcagcagctcacg
gcacgtgaaggccaagtggtgtcgttcgtgtgcagtgccgaaggagatccgactcccgtc
atcttttggatttctcctcaacgtcgccgtatcaccactaagagcacaggccgtgttatc
gtactaccagtgggcacactggagattcggtacgcccagataacagacagcggtacttat
atctgcatagctagcaatgccggtggcaatgacacatactttgccaccctcacagtgagt
gggtcgccacttgatggtgcgttggcaaatcgcacctattacgttggcgatcttaatgac
acgaacttaaatgacacgcgggtcttcctgaagttcacgttagacctgaaaaccatcctg
gtgtccacagcaatgggctgcatcacttttttgggcgtggtgctgttttgttttattctg
ctgttcgtatggagtcgagggcgtggtcagcataaaaacaatttctcagtcgagtactcc
ttcagaaaagttgacggcccggccaccagtggtggacaaggaggcgctagaaagtttaat
atgaaaatgatataa
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