Misgurnus anguillicaudatus (oriental weatherfish): 129454550
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Entry
129454550 CDS
T09481
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04145
Phagosome
manu04814
Motor proteins
manu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129454550
09142 Cell motility
04814 Motor proteins
129454550
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129454550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
manu03036
]
129454550
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
manu04812
]
129454550
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
129454550
Cytoskeleton proteins [BR:
manu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
129454550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_EML
Dynein_IC2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
129454550
NCBI-ProteinID:
XP_055075084
LinkDB
All DBs
Position
12:22506309..22592139
Genome browser
AA seq
628 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEERKKKESETQQKAEVAPEDSDLDRKRRETE
ALLQSIGISPEPSLVPTPMSPSKSMSTPSEAGSQDSVDAAAAGRTLQWDTDPSVLQLQSD
SELGRRTHRLGPSKITQVDFLPREVVSYCKETQTPLAAHQSEEDEEEDEEVTEPKVGPET
EQQEEDESKDTKEGHPRELTEEEKAQVLHSEEFLIFFDRSLRVMERALAEDSNIFFDYSG
RDLDDKEGDLQGGSSLSLSRLFYDERWSKRRVITCLDWSPQYPELLVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYIYHCQSPVLSVGFARFHPNLLVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKS
KPVAVTGMAFPAGDVNNYIVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAMG
PVDFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNSDYVYDVMWSPVHPSLFAAVDGMGRL
DLWNLNNDTEVPTASVTVEGAPALNRVRWASGGKEVAVGDSEGRVWIYDVGEMAVPHSED
WARFGRTLVEIRANHGDGEEEGPGEIVS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaagtgatttaaaagccgaacttgagcgcaaaaaacagcgccttgctcag
atcagagaggagaagaagaggaaagaggaagaaagaaagaaaaaagagtcagagacacaa
cagaaagcagaagttgctcctgaggattcagatttggaccgcaagcgcagagagaccgag
gctcttctccaaagtattggaatctcacccgaaccttcattagtcccaacaccaatgtcc
ccatcaaagtctatgagcactcccagtgaagcaggcagccaggactcagtagatgcggca
gcagctggaaggaccctgcaatgggacactgacccttctgttctccagctgcagtctgac
tctgaactcgggcgtcgaacgcacaggttggggccgtctaagataacccaagtggacttt
ttgcccagagaggtggtgtcttactgtaaagagactcagactcctcttgcagcccatcag
tctgaagaagatgaagaagaggatgaggaggtcacagaaccaaaagttgggccggaaact
gaacagcaggaagaggatgaaagcaaggacacaaaagaaggccacccgcgggagctgaca
gaggaggagaaggcgcaggttctgcactctgaggagttcctcatcttcttcgaccggagc
ctccgtgtgatggagagagctttagccgaggactccaacatctttttcgactacagcgga
cgagacctggatgataaggagggagatctgcagggtggatccagtctctctctcagtcgt
ctgttctatgatgagcgctggtcaaagcgccgggtcatcacctgtctggattggtctcct
cagtaccctgagcttttggtggcttcctacaacaacaatgaagacgctcctcacgagcca
gatggtgtggctttggtgtggaatatgaagtttaagaagaccacaccagagtacatctac
cactgccagtctccagtgttgtctgtgggttttgcacggtttcatcctaacctgttggtg
ggtggcacatactcggggcagattgttctctgggacaaccgaagccacagaaggacgccg
gttcagaggaccccactgtccgctgcagcgcacacacaccctgtatactgcgtaaatgtg
gtgggcacccagaatgccaacaacttgatcacagtgtccacagacggcaggatgtgctct
tggagtttggatatgttgtcacagccgcaggagagcatggagctggtatataataaatct
aagcctgtggctgtaaccgggatggcgttccccgctggagacgtcaataattatatagtc
ggcagtgaggagggaacggtgtatacggcgtcaagacatggcagtaaagctggtatctgt
gagatgtttgagggccatcaggggccagtgacaggcatcagttgtcacagcgccatgggt
cctgtcgacttctcccacctgtttgtcacctcctcttttgactggactgtaaaattgtgg
agcacaaagcaaaacaagccactgtactcttttgaggacaattccgattacgtctacgat
gtgatgtggtcgcccgtgcacccctcgctcttcgccgctgtggatggcatgggtcgtctg
gatctgtggaacctgaacaatgacactgaggtgcctacagctagcgtgactgtagagggc
gctcctgcgctcaaccgggtcagatgggcatctggaggaaaggaagtcgcagtgggagat
tcagagggccgtgtatggatatacgatgtcggagagatggccgtgccccatagcgaggac
tgggcccgtttcggtcgtacgctggtggaaatccgtgccaaccatggagatggtgaggag
gaggggcctggggagatagtgagctaa
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