Misgurnus anguillicaudatus (oriental weatherfish): 129454980
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Entry
129454980 CDS
T09481
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129454980 (arhgef40)
Membrane trafficking [BR:
manu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129454980 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
PH
KIAA1755_C
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
129454980
NCBI-ProteinID:
XP_073715706
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All DBs
Position
21:1079660..1121914
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AA seq
1764 aa
AA seq
DB search
MGTEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDFFIPAKHLLH
RLQQHACSQYLGCLFLHSGWPLCLEEKVVVQLSTLDWRLLRSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHSLVFTAEWLHCINKERGCNREGGGCLDTCLVSTSDGVVR
IPWEEVVYPKLLHNPSDPLKDNIDPIGLSHTSGSLDLGWGSSAGDHDSWSWDEEDDLPPD
KDEADIETALEQLRRSSGSHLAGDGAGDYVELLEPRGGPDGGADPKPQYLEMHGICKTKT
LPLCRRGKAFRLRKGKARGYARTEPGGKAGSLVRRDSNNNGRDGVVSCRDLASSRPLPRV
IDLGRERRLCPRLFKDYNEDARDPVGLEDRTLGIDSPAKERRPGVGKERDGIGCTLPWEE
SQRRKSSTDAVDDVRNKADKLGEGQRDYTKRSQSLSDDTTLTSTFHSGNEIAPSAKPSKG
DGNEALPYTMHGETENRIKQLDGGSRRTSLSDSLLNNEPESSSCAQRRTQHSDNIKDQKT
DTVLSPSGSVSPTRDKHDGNSEICVCPRGKEVKTGGFRAPRRKRKGKGGKGKVKSNGRVQ
QKTKGDHIASKNQTKATQPSDLTKSPKSLTGQSEKTPQLSKVCNGCTTVTNTETPAKTDA
KNEVSDLSCNTEGQSTTSIPDHSQTETGLIESAAQLKFKSAPTPRLRELDFNLLQSGKLM
LTGTMDRLGRALVVTESHIPEDGWNEEEMIKVLMCYYTITRPMAKEKGLTIIVDSRKSSS
SELCFSALKAFKGQEAAGLDSVLILTEEQDESIQPCLDGIEVHTVRGTGILQQFVDKQQL
PREMGGDFNHSHADWLTFRLSLEELTERCESALTLLGDALQSMDTQPLPDCIKNVPLSVG
KHAQLMTSILTDQRLTELQQRGGAWLASLANGMSGLAQKSPDCKAALAVTSNLYDGVDDA
LHRLVRLSNQRGRDLDALGRLAALVDKLDKCEREIQQVQEQLEDYKLPPLSLSSLSLKQH
KFKSFRESAMELHSETLVLLGEVESWSDLDWDGFKTVLDRLPPIREKVRDVSHCLSDCWT
QLDNTQRLLSTLTEASQWCDVVSSSSPSSSPLSSLPPIPPSRFQDARALAMDLGGGALLD
LWSQTLERYQKTLAQFKNRILQTDRVHTAAQGQEPDSSGRGRTPASSTSSLGESETEIEP
DWCPGAGGEGGLQSWGSLASLFRPQNCSTLKIGEEKKKEGVNAGGGKFLQNLLHAGKKNP
TDAPRPPKPPRRRHPSFDLQALLAPRRSAAVSKPAEPGSGQSSPLSWLSQRGLTDSILTA
GVTAAAPGWKDSAGGGGVLIRGVEVSSKEVADHTGFTRQHVLLNRTERETGLERAGVTAQ
SKLYLQWCRLVSTERLYVSVLKGVEENYLPLLESSDAPSGLRGKTESLFSNWKSLSAFHS
QLLFPAMEGALSQTLQQTDCFTKYRDQFLLYSHYIRMKPEPDAVLITQAADFFRSKLSSS
LVPVPPFPQCLSAPIQRLEQYCQTLEELGGLNPTSDSALSIIRHAQRHGEDLRASDLITG
CPVAVSERGDLLRQGELCVCSGGRRKKTGVRNVFLYQNYIIFTKHKTPNPGCSQYSFKHS
IKSSEMGLTQNVGEDGLKFEVWVRQVSRTKDCLTLQTSTVQEKQAWTHDIAQLLWTHAMH
NTELCLKESLCMGVSSKLLLDVTGAQNSELDSSFSLNERVQSSCSDSSSVGSLKEGDSPA
SVRDLKRNTEQTGHAQSSSPSTSV
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagaggcagtagaggactgcgtgcagggagcgctctcatccctctaccctccg
tttgaaagcacagctcctcctctgctctctcaggtgttctctgtactcgagtccacgtat
cagcacgacagcttgaggtatctcttggatttcttcattcctgccaaacatcttctgcac
agattacagcagcatgcatgttctcagtatctgggctgtctcttcttgcattctggttgg
cctctgtgtttggaagagaaggtagtagtacaactatctactttggattggagactcctg
cgcagtaccgacttctacctgcaggtggtacccttctcaacacgctgcccccgccttgct
cttaagtgcctcgcaccaggtgggcgcaatgtacaggaggtcttagtgccagagtctcag
cactcactcgtgttcactgctgagtggctacattgcatcaacaaggagcgtggctgcaac
agagaaggtggaggatgtttggacacctgtctggtgagtacatcagacggagtggtccgt
attccatgggaagaggtggtatatcctaaactcctgcacaatccctctgacccactcaaa
gacaatattgacccaattggcctgtcccacacttcagggagtctggaccttggctggggc
tcctccgcaggagaccatgattcctggtcctgggatgaagaagatgacttgcctccagat
aaggatgaggcagatattgagactgcgttagaacagctgcgaagaagcagtggttcccac
cttgcaggcgatggtgctggagattatgtggagctgctagaacctcgaggaggcccagat
ggtggagctgatcctaaaccgcaatatttggagatgcatgggatttgtaagaccaaaaca
ttgcctctgtgccggagaggtaaagcattccgactgcggaaggggaaggctagagggtat
gcacggaccgaaccaggtggaaaggctggaagtctggtacgaagggacagcaacaacaat
ggcagggatggtgtagtttcctgcagggatctagctagctcacggcccctgcctcgtgtc
attgatttgggtcgtgaaaggagattgtgcccccgtttgttcaaggactataatgaagat
gctagagacccagtaggtctggaagatagaactcttggtatagacagtccagccaaagaa
aggagaccaggggtaggaaaagagagagatgggattgggtgtacacttccctgggaggag
agccagagaaggaagtcttccacagatgctgttgatgacgtgaggaacaaagcagataaa
cttggagagggacagagggactacactaagcgatcacagagtcttagtgatgatacaaca
ttgaccagcacttttcacagtggaaatgaaattgcaccatcagcaaaaccctccaaaggt
gatggtaatgaagccctcccatacactatgcatggagaaacagaaaacagaatcaagcaa
ctggatggtggatctaggagaacgtccctctcagattctctcctaaacaatgaaccagaa
tcatcaagttgtgctcaaagaagaacccaacactcagataacatcaaagaccagaagaca
gacacagttctgtcaccatcaggttctgtgagtcccacaagagacaagcatgatgggaac
tcagagatctgtgtatgtcccagaggaaaggaagtaaaaactggaggattcagagcacca
aggaggaaaaggaagggcaaaggaggaaaaggcaaggtcaaatcaaatggccgtgtccaa
caaaaaaccaaaggtgatcacatcgcctctaagaatcagaccaaagcaacacaaccaagt
gacttaacaaaatcaccaaagagccttactggccaatcagagaagactcctcagctttca
aaagtttgtaacggctgtacaacagtcactaacacagaaacgccagcaaagacagatgcc
aaaaatgaagtttcagacttatcatgtaatacagagggccagtctaccacatctattcca
gatcactctcaaacggaaacaggattgattgaatctgctgctcagttaaagtttaaatca
gcccccactccccgccttagggaactagatttcaatctactgcaatcaggaaagctcatg
ttaacaggtactatggaccgattagggcgagcattggttgtcacagaaagtcacatccca
gaagatggctggaacgaagaggaaatgatcaaagtgttgatgtgttattacaccatcacc
agacctatggccaaagaaaaaggccttactatcatcgtagacagcagaaagtcctcttca
tctgaactctgtttctctgcactgaaggcctttaagggacaagaggcagcagggcttgac
tcagttcttatactaactgaggaacaagatgaatcaatccaaccctgtctggatggcata
gaggtgcacacagtgcgaggtaccggcatcctacagcagtttgtggacaagcagcagctg
cccagagaaatgggtggagattttaaccactcacacgctgactggctgacattcagactg
agtctggaagagttgactgagcgctgtgagagcgccctcaccctgctgggagatgcactg
cagtcgatggacacacagccactacctgactgcatcaagaacgttcctcttagcgttggc
aaacacgcgcagttaatgacgagcatcctcactgatcaacggttgacggagctgcagcag
aggggcggggcttggctcgcaagtctggccaatgggatgtcagggttggcacagaaatca
ccagattgcaaggctgctttggcagtgacctctaacctctatgatggtgtggacgatgcg
cttcaccgtctggtgcgtttgtccaatcagaggggtcgtgatctggacgcattgggacga
ttggctgcacttgtagataaactggataagtgtgagcgagagattcagcaggtccaggaa
cagttagaggactacaaacttcctcccctgtctctaagcagcttgtctctcaaacagcac
aagtttaagagcttcagagaatctgctatggagcttcacagtgagactctggtgttactg
ggagaagtggagagctggtctgatctggactgggacggcttcaagacagtactggacaga
ctccctcccattagggaaaaagtgcgagacgtgtctcactgtctgtcagactgctggacg
caactggacaacacacagagacttctgtctacacttactgaagcctctcagtggtgtgat
gtggtgtcatcttcatctccctcctcctctcctctctcctccctcccacccatccctcca
tcacgtttccaggacgctcgggccctggcgatggatctgggcgggggagctttgctggac
ctctggtctcagactctggagcgctaccagaaaactttggctcagtttaagaacagaatc
ctgcagacggacagggtccacacagcggcccagggtcaggagcccgactccagcggacgg
gggagaactcctgcttcgagcacatccagtctgggtgaatcggagacggagatcgagccg
gattggtgccctggcgcggggggagaaggtggcctgcagtcctggggttcgctggcgtct
ctcttccgcccacagaactgctcgacgctgaagatcggggaagagaagaagaaagaagga
gtcaatgcaggaggagggaagttcctgcagaacctgctgcacgccggcaagaagaatccc
acagacgccccccgccctccaaaacctccccgcagacgtcatcccagttttgatcttcag
gctctgctggctccgcgccgttcggccgccgtgtccaaacctgcggagcctgggtcgggt
cagtcctctccgctgtcctggctgagccaacgggggctgacggactccatcctcacggcg
ggggtgactgcagcggcacctggatggaaggattcggccggaggtgggggggtgctcatc
agaggagtggaggtcagcagtaaagaggtggccgatcacacgggcttcactcgtcagcac
gtgctgctcaaccgaaccgaaagagagacgggtctggagagagctggggtgaccgcacag
agtaaactgtatttacagtggtgtcggctggtcagcaccgagcgtctgtatgtatctgta
cttaaaggcgtggaggaaaattatctgcccctcttggagtcttcagacgccccgtctggt
ctgaggggcaaaaccgagtcacttttctctaactggaaaagcctttctgcattccactcg
cagttactcttccctgccatggagggcgctctctcccagacactacagcagactgactgc
ttcactaaatatagggatcagttcctgctgtattcccactacatccgtatgaaaccggag
ccggatgctgtactgatcactcaggctgccgacttcttcaggtcaaagctgtcttcctct
cttgttcccgtccctccatttcctcagtgtctctccgctcccattcagagactggagcaa
tactgccagacactggaggagctcggtggtcttaaccccacctctgactccgccctctct
attataagacacgcccagcggcacggagaggatctgcgagccagtgacctcatcacaggg
tgtccggtagcggtatctgagcgtggtgatctgttgcgtcagggtgagttgtgtgtatgc
agtggaggcaggaggaagaagacgggtgtgagaaacgtcttcctctatcagaactacatc
atcttcaccaaacacaaaacaccaaaccctggatgcagtcagtacagctttaaacacagt
attaagtcgtctgagatgggtctcactcagaatgtgggtgaggacggactgaagtttgag
gtgtgggtgagacaggtgtctcgcaccaaggactgtctcactctccagacctccactgta
caggagaaacaagcttggactcatgacatcgctcagctcctctggactcatgcaatgcat
aacacagagttgtgtctgaaggagtctttgtgtatgggagtttccagtaagctgctactg
gatgtgacgggtgctcaaaactcagaactggactccagtttcagcctgaacgaaagagtt
caaagcagttgttcagactcatcgtctgtggggagtttgaaagagggcgactcgcccgca
tctgtacgagatttaaagagaaacactgagcaaacgggacacgctcagagctcttcaccc
tccacctctgtttga
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