Misgurnus anguillicaudatus (oriental weatherfish): 129454987
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Entry
129454987 CDS
T09481
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129454987 (tdp2b)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
129454987 (tdp2b)
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Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
TAP_C
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
129454987
NCBI-ProteinID:
XP_055075584
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All DBs
Position
12:8052307..8057073
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AA seq
400 aa
AA seq
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MARRYFFLQSVNMSSNVTSGNHTDKQMSALEETRRNLCDQFAHVSGSESAVAQCYLAEND
WDMERALNSFFEAHMDSVFDVEDEEETKNESGKKRKEVDSPETADSKGAKKSKSDKVHCI
DLTVEEPSCSSNMNSKESQAVSKGSQSDDGDGKLSVISWNVDGLDTLSLADRARGLCSYL
ALYTPDVVFLQELIPAYIQYLKKRAVSYLFIEGSEDGYFTGIMLKKSRVKLLQSDIICYP
TTQMMRNLLVAQVTFLGQKLYLMTSHLESCKNQSEERMKQLRVVFQKIREAPDDVTVLFG
GDTNLRDSEVVKVGGLPQGVCDVWEQLGKQEHCRYTWDTKANSNKSVPYVSRCRFDRIYL
RSAKTGPKFTPDHMVLVGMEKLDCSRYTSDHWGIYCTFTT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgttatttttttttacaatctgtgaacatgtccagtaatgtcacgtcaggt
aatcacaccgataaacaaatgtctgccctggaggaaacaaggaggaatctttgcgatcag
tttgcacatgtctctggatcagaaagtgctgttgcacagtgttatctggcagaaaatgac
tgggacatggagagagctttgaactctttcttcgaggctcatatggattcagtctttgat
gttgaagatgaagaggaaaccaaaaatgagtctgggaaaaagagaaaggaagtggattca
cccgagacagctgatagtaaaggagcaaagaaatcaaagtctgacaaagtgcattgcatt
gacttgactgtggaggagccgtcctgttccagcaatatgaactcaaaggaaagtcaagct
gttagtaaaggatcccagtctgatgatggagatggcaagctctcggtcatcagctggaat
gtggatggactggacacattaagtctcgctgaccgtgcaagaggcttgtgctcatatcta
gctctctatacaccagatgtggtatttcttcaagaactcattccagcttacattcagtat
cttaaaaagcgcgctgtcagctacttgttcatagaaggtagcgaggatggatacttcaca
gggataatgctgaagaaatcaagagtaaaacttttgcaaagtgacatcatttgttatcct
acaacacagatgatgaggaatctgttagttgctcaggtgacctttttagggcagaagcta
tatttgatgacttcacacttggaaagctgtaagaatcaatcggaggagagaatgaaacag
ctgcgagtcgtatttcaaaagataagagaagcaccagatgacgtcactgtccttttcggt
ggggataccaatctcagggacagcgaggtggtaaaggtcggaggcttacctcaaggtgtg
tgtgacgtgtgggaacagctgggcaagcaggaacactgcaggtacacctgggacaccaaa
gcaaacagcaacaagagcgtgccttacgtcagcagatgtcgcttcgaccgcatctacctt
aggtctgctaaaaccggacccaaatttactcctgaccacatggtcttggttggaatggag
aaactggactgtagccgttacacaagcgatcactggggaatttactgcacttttactacg
tga
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