Misgurnus anguillicaudatus (oriental weatherfish): 129455145
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Entry
129455145 CDS
T09481
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03250
Viral life cycle - HIV-1
manu03272
Virion - Hepatitis viruses
manu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129455145 (pdcd6ip)
03272 Virion - Hepatitis viruses
129455145 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129455145 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129455145 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
manu04147
]
129455145 (pdcd6ip)
Membrane trafficking [BR:
manu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
129455145 (pdcd6ip)
Exosome [BR:
manu04147
]
Exosomal proteins
Proteins found in most exosomes
129455145 (pdcd6ip)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
ORF6N
COG3_N
Motif
Other DBs
NCBI-GeneID:
129455145
NCBI-ProteinID:
XP_055075796
LinkDB
All DBs
Position
20:22471729..22487409
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AA seq
875 aa
AA seq
DB search
MATFISVPLKKSSDVDLVKPLSKFVTSSYPPGEEQAEYLRAVEELNKLRKSAVGRPLDKH
ESSLEILLRYYDQLCAIESKFPFTELCVTFTWKDAFDKGSLFGGSVKLALASVGYEKTCV
LFNVGALASQIASEQNLDNDEGLKSAAKFYQLASGAFAHIKDTVLSSLNREPTMDISPET
VGTLSQIMISQAQEVFVLKATADKMKDAIVAKLANQAADYYGDAFKQCQYKENLPKYFYF
QEVLPVLAAKHCMMQANAELHQSILAKQKKKFGEEIARLQHATELVKTAASRYDEYVNVK
DLSDKISRALTAAKKDNDFIYHDRVPEVKDLEHIGKASLVKATAVQTPLSQKFSDLFEKM
VPMAVQNSVSAANARKSDTVNRLIGSMREATNLCNGVLASLNLPAALEDLSGDSVPQSIL
EKSRAIVQQGGLQSIEQLIRDLPELLTRNREILDESLKILDEEETTDNELRAKFNQRWSR
TASGDLYKPLRAEGTNFRNILDKAVQADQVVKERYNAHCEMIALLCKPENELCAAIPSAN
PAKTLQGSEVVNVLRAQLAQLDEVKKEREVMEGEIKSVTFDMTTKFLNALAQDGAINEEV
LTSSELDTRYGSYTQRVQQNLRRQEELLSQIQVSHQEFSTLKQSNSEANNREDVLKKLAS
AHDSYIEISCNIREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKELQQSIAREPS
APSFNVPSYQSNTPASATVGPTPAPRTVFTQQPQQPQAKPQPPARPPPPNITPQAASASV
PVSAPMAPGGSNPPPVAPPTGPSQAQGPPYPTYQGYPGYYQMPMTYNPYAYGQFNMPYMP
YQAQGQAQYPGAPPAQQPYPYPQQPPQQQPYYPQQ
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttctgtgccgttaaaaaagtcctcagatgtcgacttggtgaaaccg
ctgtcgaaatttgtaacgtcctcgtatcctcccggcgaggagcaggcagagtatcttcgt
gccgttgaggagctcaataagctccgtaaaagtgctgttgggaggccgctggacaaacac
gagagctcgctggaaatcttgctacgatattatgatcagctctgtgcaatcgaatccaaa
tttccttttacagagctctgtgtgacattcacatggaaggatgcctttgataaaggatct
ctttttggcggctcagtcaagcttgccttggcaagtgttggttatgagaagacttgtgta
ttgtttaatgtgggagcgctggccagtcagatcgcttctgagcagaatctggacaatgat
gagggactgaagtctgctgctaagttctatcagctggctagtggtgcatttgctcatata
aaggacacagtgctttcttcactcaatcgggaacccacgatggacatctcgcccgagaca
gtgggcacactcagtcagatcatgatcagccaagcacaggaggtcttcgttctcaaagcc
actgcagataagatgaaggatgcaatcgttgctaaactcgctaaccaggctgcagactac
tacggtgatgcttttaagcagtgtcaatacaaagagaatctgcctaagtatttttatttc
caggaagtgcttcctgtccttgctgccaagcactgtatgatgcaggctaacgcagagctc
caccagtcgatcttggccaagcagaagaaaaaatttggagaggagatcgcacgactgcag
catgccacagagctggtgaagacagcggcttcccgatacgatgaatatgttaacgtgaaa
gatctgtcagataagatcagccgtgcgcttacggctgcaaagaaagacaatgacttcata
taccatgaccgcgtgccggaggtcaaagacctggagcacatcggcaaagcctctcttgtc
aaagcgaccgcagttcagacgccactcagccagaagttctcagatttgtttgagaaaatg
gtgccgatggcagtgcagaactcagtgtctgcagccaatgctaggaagtccgacacagtg
aaccgacttattggcagcatgagagaagcaacaaatctctgcaatggggtgctggcgtct
ctgaacctgcccgccgcactggaggatctgtcaggagactcagtccctcagtctatcctg
gagaagagtcgtgctatagtgcaacaaggtggtttacagagcatcgaacagctgattaga
gatctacctgagcttcttacaaggaaccgtgagatcctggatgagtccttaaagatatta
gatgaggaagaaacaacagacaatgaactccgagccaaattcaaccagcgctggagcaga
actgcctcaggagacctttataaaccactcagagcagagggaactaactttcgcaatata
ctggacaaggcggtgcaggctgatcaggtggtgaaagagcgttacaatgcacattgtgag
atgattgctttgctctgcaagccagagaatgagctctgtgctgccataccgtcagccaac
cctgccaaaactctacagggaagtgaggttgtgaatgtgctaagagctcagctggcacag
ctggatgaggtgaaaaaggaaagggaagttatggaaggagagattaagtcagtgaccttt
gacatgactacaaagttcctaaacgctctggctcaagatggtgccattaatgaggaagtc
ctaacgtccagtgagctggacacacgctacggttcttatacacagcgtgtccagcagaat
ctacgccgacaagaggagctcctgtcacagatacaggtgtcccatcaggagttttcaaca
cttaaacagtcaaactctgaggccaataacagagaagatgttttgaagaagctggcctca
gcccatgatagctatatagagatcagctgcaatataagagagggcactaagttctacaat
gatctgacagaaatcctgctgaagtttcaaaacaagtgtagcgacattgttttcgcccgc
aaaactgagagagatgaactgctcaaggagctacagcaaagcattgctcgtgagccaagt
gctccatcattcaacgtcccatcttaccagtccaacacccctgcttctgctacagtaggt
cctacccctgcacccaggactgtgtttactcaacagccgcagcagcctcaggctaagccc
cagcccccagccaggccaccacctcctaacatcacaccacaggcagccagtgcgtcagtt
ccagtcagtgctccaatggcccctggtggctctaatcctccacctgttgcgccacccact
ggaccctcacaggctcaaggaccaccctacccaacttatcaaggctacccagggtattac
cagatgccaatgacctacaacccctatgcatatgggcagtttaatatgccctacatgccc
tatcaagcccaggggcaggctcaatatcccggagcacctccagcacagcagccctacccc
tatccacaacaaccaccacagcaacagccctattacccccaacagtaa
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integrated database retrieval system
