Misgurnus anguillicaudatus (oriental weatherfish): 129455315
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Entry
129455315 CDS
T09481
Symbol
arhgef1a
Name
(RefSeq) rho guanine nucleotide exchange factor 1a isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129455315 (arhgef1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129455315 (arhgef1a)
Membrane trafficking [BR:
manu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129455315 (arhgef1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
C1_2
Prok-RING_1
PHDvar_NSD
pAdhesive_15
PHD
Motif
Other DBs
NCBI-GeneID:
129455315
NCBI-ProteinID:
XP_055075996
LinkDB
All DBs
Position
12:30048398..30106166
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AA seq
1118 aa
AA seq
DB search
MGPEESLDIMGPPAVTLRSPSNRHLIELDPWRRHSWEPGAVAQGCIPNDTRSASLEDLDP
DEMALVLNGALRSKRARESRRSVTQISLTSLTEEEVGVEHQEHHRSALEEQSNHMHGCSA
SAPSLCIMRPRSSAPRPRSYGHDSVSYHQFGGSSHSIDSECLEFDRGQIKEEGDENKRDT
SGNRLERTLSFLRRMAAQRKNKEKERMREREREAREREARYSNGHLFNCLTVSGTTLCSA
CNKSITAKEALSCPTCNVTIHNRCRDTLPNCVKMKQKQQKLALMRNNSAYQNVTLRNKAH
LKDRPSSAIYPSDSLRQSLLGARRGRSSLLLSKSVSTNNIAGTLNDDSPLGLRRILSQST
DSLNFRSRTMSMESLNDEGEGYFNSLLEELEYEGREFEADSWSMAVDSAYLQTHRKDVIK
RQDVIYELIQTEIHHVRTLRIMEGVFRRGMLEEVQLEPGVVHALFPCLERLLSLHTHFLN
QLLARRSHSLQNDSTNNFTITQISDVLMKQFSGQCADEMLKAYAEFCSRHMKAVKLYKEL
LARDKRLQLFVRRASRGPLLRRHGFQECILLVTQRITKYPVLVQRIYDNTKDNPEEAAGL
SQALCHIRELLSSIDHQVMELERTHRLQEIRSKVDPRAEAKLRSGALFKPAEFLRRQLIH
EGTLLWKTPSSRLKDVHVLLMTDILVFLQEKDQRFIFASLDKSAVVSLQNLLIRDIANQE
RGLFLISESSPPEMYELYAASKEDRNTWIRLIQQTISSCPSREEFPLIETEDKALLRRLK
ADIQQKDREVLELLQERVTLFSDMAEVMGGYEIALPPCSRNLFRADSSQAPQGEQLLTHA
ITEVDRLTELLLGSDFEISVPCSSNGHHNHTGALVINGQEVLVNGSQENQAAQDGNGNQM
ADKISSEGVSQRLVNLSAQLHALQGVVIQQDSILELTLRENPVSPATTVFRAVRSMSRDA
ASDVGSMGELTLLQRQHSLLQEELVRLRVAEGKLRESERARAQLEKQLRDLKSNSAAPVD
STGTTGSQAPPTRRESDTDPNPDIPLVSQESMDQSDGLQECSDVEVDVISDDDDDDDDDD
DQVDSRRSPRSESPRDLQDIPEESESAVDSRGPCESNC
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccgaggagtcacttgacattatgggccctccggctgtgactttgcgttcccct
tccaatcgtcacctgatcgagctcgacccctggagaagacacagctgggagcccggagcc
gtggcgcaggggtgtattcccaatgacacccgcagtgcaagtctggaggatctggaccca
gacgagatggccttagtgctgaatggtgcattgaggtctaagagagctcgagagtcccgg
agatctgtcactcaaatttccctcacatcacttacagaggaggaagtcggagttgaacat
caagaacatcatcgctcggcgctggaggaacagtctaatcacatgcatggctgcagtgcc
tccgcccccagtctgtgtattatgcggccaaggagctctgcccctcgcccacgctcttac
ggccatgacagtgtttcgtaccaccagtttggaggatcatctcacagtattgacagtgag
tgtttagaattcgacagaggccaaataaaggaagagggagacgaaaacaaaagggatacg
tcaggaaatcgcctggagcgaaccctaagcttcctgcgcaggatggccgcccagcgtaag
aataaggagaaggaacgcatgagagagagagaaagagaagcgagggagagagaggcacgc
tacagtaacggccacctcttcaactgtcttactgtgtctggaacaacgctatgctcggcc
tgcaacaagagcatcacggctaaagaggctcttagctgcccgacttgtaacgtcaccatc
cacaatcgctgccgggacacgttgccgaactgtgtgaaaatgaaacaaaagcagcagaaa
ctggcgctgatgaggaacaattcggcctatcagaacgtgacgttgaggaacaaagcacat
ttaaaagatagacccagctcagccatttacccttcagacagtcttcggcagtcactgcta
ggtgctcgacgcgggcgatcttctctcttattgtccaaaagcgtctcaaccaacaacatt
gcagggactctgaatgatgactctcctctgggactgcgcaggatcttgtcccaatccaca
gactctctcaacttcaggagcaggaccatgtccatggagtcacttaacgatgagggagag
ggatacttcaattctttgttggaagagctggagtacgaggggcgggaatttgaagcggat
tcctggagcatggccgttgactctgcttacctgcagacccaccgtaaagacgttatcaag
agacaggatgtcatttatgagttgatccagacggagattcaccacgtgcggacgcttcgg
atcatggagggggtgtttagacggggtatgcttgaagaggtgcagctggagccgggggtc
gtacatgcgctgttcccctgcctggagcgactgctgtcgctgcatacacatttcctcaac
cagctcctcgctcgccgctcccacagccttcaaaatgacagcactaataatttcaccatc
acccagatcagtgatgtgcttatgaaacagttttcaggtcaatgtgcagatgaaatgctg
aaggcctacgccgaattctgcagtcgtcacatgaaagctgtcaaactgtacaaagagctg
ctggctagagacaagagactccagctcttcgtacggagggcgagtcggggacctctgctc
cgtcgtcatgggttccaagagtgcatcctgctggttacccagcgcattaccaaatacccc
gtcctggtgcagcgtatctatgacaacaccaaagacaatcccgaggaagctgcaggcctg
tctcaagctctgtgtcacatacgcgagctgctcagctccatagatcatcaggtgatggag
ctggaaaggacacatcggttacaggagatccgttccaaggtcgacccgcgtgccgaggct
aaactccgctctggagctttgtttaaaccggcagaatttctccgcagacaattgatccat
gaagggacgctactctggaaaacccccagctctcgactcaaagatgttcatgttctgttg
atgacggacattttagttttcttgcaagagaaggatcaaaggttcatctttgccagtttg
gataagtcggcagttgtttcgctgcagaatctattgatcagagatatagccaatcaggag
cgagggctgttcctgatcagcgagtccagcccacctgagatgtacgagctttacgctgca
tccaaagaggatagaaacacctggatacggctcatccagcaaaccatcagcagctgtccc
tcaagagaagaattcccgttaatagaaacagaagataaggcccttctgcgaagactcaaa
gctgatatccagcagaaggacagggaggtgttagagcttcttcaggagcgggtaaccttg
ttttctgacatggcagaggttatgggaggttacgagatcgccctgccgccttgttccaga
aacctttttagagccgattcttctcaggccccgcagggagaacagctactcactcacgcc
ataaccgaagtggacaggttgacagagctgctgttaggatctgattttgagatttctgtg
ccctgcagttccaacggccaccacaaccacactggagcgctagtaatcaatggtcaagag
gtgctagtcaatggctctcaggaaaaccaagctgctcaggatggaaatgggaatcaaatg
gcagacaaaatatctagtgagggggtgtcacaaagactggttaatctcagtgcacaacta
cacgctctgcagggtgtggtgatacaacaagactccatcttagagctcaccctacgggag
aaccctgtgtctccagccactacagtgtttcgtgcggttcgctctatgtcccgggatgcc
gcgagtgacgtaggctcgatgggcgagctgacgctgctgcaacggcaacacagtctctta
caggaggagcttgtgcgactcagggtagctgaaggaaaactcagggagagcgagagagca
agagcccagctggaaaaacagctcagggatcttaagagcaatagtgccgctccagtggac
agtactggaactacaggctcacaggccccacccactcgcagagagagcgatacggacccc
aaccctgacataccattggtcagtcaggaatctatggaccaatcggatggcttgcaggaa
tgcagtgacgtagaagtggacgtgatatccgatgatgatgatgacgacgacgacgacgac
gaccaggtggattctaggaggtctcctcgttcagaaagtcccagagatttacaagacatt
cccgaggaaagcgagtcagccgtggattcccggggaccctgcgaatcaaactgctaa
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integrated database retrieval system
