Misgurnus anguillicaudatus (oriental weatherfish): 129455340
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Entry
129455340 CDS
T09481
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129455340 (rnf115b)
04121 Ubiquitin system [BR:
manu04121
]
129455340 (rnf115b)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129455340 (rnf115b)
Membrane trafficking [BR:
manu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129455340 (rnf115b)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129455340 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Zn_ribbon_20
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
129455340
NCBI-ProteinID:
XP_055076028
LinkDB
All DBs
Position
20:complement(30152183..30165838)
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AA seq
307 aa
AA seq
DB search
MAEAAARHRFFCHCCKGEIDPKLPEFVCPRCESDFIEEVLENSSLLQSTDGTDAADVDSD
EMNSQFAELCQLLFMEHSALLSDPTVTDALPSRSGVEATVGDPAPGTLGPVASVETLRDC
TESTQLPQENSQQRNTRLDQEQAVEGIVQQFLAGLFTNDESTDSQTSSWSSMLHSNPGDY
AWGQGGLDVVITQLLGQSECSGPPPAEKEMISSLPTISISTEQAACRLECPVCREAYSAG
ESVLQLPCLHCYHTNCIVPWLQLHDTCPVCRKSLDGEDRGFQPPSTPSGPVPSSSPNTEE
QSTFETL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgccgcgcgacaccgcttcttctgtcactgctgtaaaggtgaaatcgat
ccaaaactgccggagtttgtatgtccaagatgtgaatctgacttcattgaagaggtgtta
gagaattccagtcttttacaaagcactgatggcacggatgcagcagatgtagacagtgat
gaaatgaactcacagtttgcagagctgtgccagctgttgttcatggaacattcagccctc
ctttctgaccccacggtcacagatgccctccccagccgctctggggtcgaggctacagtt
ggtgatcctgctcctgggacactgggacctgtagcctccgtggagactttaagagactgc
actgagtcgacacaactccctcaagaaaacagccaacagagaaacactagactggatcag
gaacaggctgtggaggggattgtccagcagttcctggctggtctttttaccaatgatgaa
agcacagattcccaaacatcttcatggtcaagcatgttacactctaaccctggagattat
gcttggggacaaggtggtctagatgtggtcattacacagttgctcggccagtctgaatgt
agcggtccccctcctgctgagaaagagatgatctcatctcttcccaccattagcatctcc
acagaacaggctgcatgccgactggaatgccctgtgtgcagagaggcatattctgcaggg
gaatctgtcctgcagctgccctgtctgcactgctatcacaccaactgcattgtgccttgg
ctacaactgcacgacacctgtcctgtctgtcgcaaaagtctggatggtgaagaccgcggt
ttccagcctccatctacaccttcaggtccagttccctcatcatcaccgaacacagaggaa
caaagcacatttgaaactctttag
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