Misgurnus anguillicaudatus (oriental weatherfish): 129455813
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Entry
129455813 CDS
T09481
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
manu01009
]
129455813 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129455813 (sfpq)
03041 Spliceosome [BR:
manu03041
]
129455813 (sfpq)
Protein phosphatases and associated proteins [BR:
manu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129455813 (sfpq)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129455813 (sfpq)
Spliceosome [BR:
manu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129455813 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
129455813
NCBI-ProteinID:
XP_055076590
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All DBs
Position
20:20850355..20882356
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AA seq
626 aa
AA seq
DB search
MSRDRSRNRGGFQQRGRGGFGMRGGMGNPFFRNQNQQPFQNRGGHMGGGNRPNLGFQQNQ
VSTPQKPQEPAQNKPAIQSPPAQVQGTAQQSNAAANKGPSTPQAASAANVTPKIQSPPPQ
NNANVKNPDLGSPQNQPKPNVNVNQPKQNVNQPKQNVNQPKQNVYQPKQNVNQPKPGMGN
GQKPPNVTPLKEPEQAKQSPKMNDDVPQSHELKATLSLLRKPGEKTYTQRCRLFIGNLPN
DITETDFRKMFAKFGEPSEIYISQSKGFGFIRLESRAIAEIAKAELDDTPMKGRPLRVRF
ATHSAALSVRNLSPFVSNELLEEAFSQFGVVERAIVIVDDRGRSTGKGIVEFSSKPAARK
AIDRCNDGVFLLTTSPRPVVVELLEQYDDEDGLPEKLAQKNPTYQKERENPPRFARPGTF
EFEYSQRWKSLDEMEKQQRQQVEKNIREAREKLEGEMEDAYHEHQANMLRQDLLRRQEEL
RRMEEMHSQEMQKRKEMQLRQEEERRRREEEMLRQRELEEQMRRKREESYRMGGYMDNRD
REMRMNAGGGMGLSDMSFGSASQKFQLSGLNFEAQGLAGTSPAGMASNEMRNERFPQGGP
RGMGAGNPGYGRVREEFDGPAKKPRF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgatcggtcccgtaaccgcggaggattccagcaacgaggccgcggaggcttc
gggatgcgcggtgggatgggaaacccattctttaggaatcaaaaccagcagcctttccaa
aaccgtgggggccatatgggcggtgggaacaggccaaacctgggatttcaacaaaatcaa
gtctctacgccgcagaagccacaggaacccgcacagaataagcctgctatccagtcaccg
ccggcccaagttcaaggcacggcccaacagagtaacgccgcagcaaacaaaggcccgtcg
acgccgcaggctgcaagcgccgctaacgttactccgaagatccagtctccgccgcctcaa
aataacgccaacgtgaagaacccagacctcggttctccacagaaccaaccaaaacctaac
gtaaacgttaatcaaccgaaacagaacgttaatcaaccgaaacagaacgttaatcaaccg
aaacagaacgtttatcaaccgaaacagaacgttaatcaacctaaacctggaatggggaat
ggccagaaaccacctaacgttactccgttaaaagagccagagcaggcaaaacaaagtcca
aaaatgaacgatgacgtccctcaatctcatgagctgaaggcaacactgtctctactgcgc
aagcctggggagaaaacatatactcaacgttgccgattgtttattggtaacttgccaaac
gacatcactgaaacagatttcaggaaaatgtttgcaaagtttggggaacccagtgaaatc
tacatcagtcaaagcaaaggttttggctttatcagactggaatctcgtgccattgctgag
attgcaaaagctgagctggatgatactccgatgaaaggcagaccactccgagttcgtttt
gccactcattctgctgcactgtctgtgcgcaacttgtctccctttgtctcaaatgagcta
ttggaagaggccttctctcaatttggagtcgtggaaagagccatagttattgtggatgat
cgtggacgttccacaggcaaaggcattgtggaattctcttccaaacctgcagctcggaag
gccattgatcggtgtaatgatggggtgttccttcttacaacgtcacctcgaccagtggtt
gttgaattgttagagcagtatgatgatgaggatggtttgccagagaagcttgcccagaag
aaccccacttatcaaaaggaacgggagaaccctccacggtttgcccgtcctggcaccttt
gagttcgaatactctcagcgctggaagtctctcgatgagatggagaaacaacagaggcag
caggtggagaagaacattcgtgaagcccgtgaaaagctggaaggagaaatggaagatgcc
tatcacgagcatcaggcgaacatgctcagacaggaccttcttagacgtcaagaagagctt
cgacgcatggaagagatgcacagccaagagatgcagaagcgtaaagagatgcagctcaga
caagaagaggaacgccgcaggagagaggaagagatgttgcggcagagggagcttgaggaa
cagatgaggcgcaaacgtgaggaatcttacagaatgggcggttatatggacaacagagac
agggagatgagaatgaatgctggtggaggcatgggtttgtcagatatgtcatttggatca
gctagccagaagttccagttgtcaggattgaattttgaagcacaaggattggcgggaaca
tcaccggcgggcatggcgtccaacgaaatgcgcaatgagcgtttcccacaaggtggccca
aggggcatgggtgctgggaacccaggatatggcagggtccgtgaggaatttgatggacct
gccaagaagccacgcttctga
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