Misgurnus anguillicaudatus (oriental weatherfish): 129455915
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Entry
129455915 CDS
T09481
Symbol
col14a1b
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
manu00535
]
129455915 (col14a1b)
Proteoglycans [BR:
manu00535
]
Extracellular matrix (ECM) proteoglycans
Others
129455915 (col14a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_nematode
DUF4959
VWA_3
DUF4992
L27_N
DUF5044
Motif
Other DBs
NCBI-GeneID:
129455915
NCBI-ProteinID:
XP_073714794
LinkDB
All DBs
Position
20:38959925..38992747
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AA seq
1850 aa
AA seq
DB search
MQVRLLFILIVTSALHTHAQVLSPRRLRFKVLSPGVLTVTWNKPKGEFDSYRLVYSTDSG
GFEQEVSVNKNDPKAVIQGFDPSKEYTVKITTVRGTEESKPLMATYTGVGSEVSEVSVRQ
DPRDPEHDSQTSEVDIFMCKTPAIADIVILVDGSWSIGRINFRLVRMFLESLVKAFSVGS
EHVRIGLAQYSGDPRIEWHLHTHRTKESVIDAVKNLPYKGGNTLTGLALTYILENSFKPE
SGSRPDVPKIGILITDGKSQDDVHSPAQRLRDSGIELFAIGVKNADENELRTIASPPEET
HVYNVADFSVMSSIVEELTKTVCERVNDLSKEISGETVPYSTRSFDAPSNLITSEVTARS
FRVSWTHAPGQVEKYRVVYYATKGSKPEEVVVNGDENSVMLDYLNSLTEYEIAVFAIYSN
SASEALRGSETTLALPTVNNLELYDITHSTMRVRWQVAEGASGYMILYAPLTRGEAADEK
EVKVDDSVTQVELEGLSPDTEYTVTVYGMYGEEASDPMTAQQTTLPLNPPRNLRITDISH
SSAKVSWDSASRKVKGYRIVYVKTDAVETDQVDVGPVTTLVLRNLTSMTEYTVAIFAIYD
EGQSDPLTDSFTTSVVPLPVNLRSSDVSTDSFKVTWQHAASDVSVYRLIWRPAAGGETKE
VLINDNSNWYMITGLKPLTEYEVSLSGIYRDESESDQVEIIESTVARTTTAATTTKSTPA
AVVRQAVRNLKLSDLTTFSMRVSWDSAGPNVRQYKVSYISTRGDRAEQLSMVPAGQMSAV
LQPLLSDTEYRVSVSAVYSDGDGPVLTRVARTLPLSAPSNLRVSEEWYNRFRITWDSSSS
PTMGYRIVYQPISVSGRALETFVGDDVNTMLILNLLSGTDYSVKVIATYTTGSSEALIGR
AKTLYLGVNNLNTYQVQVTSMCAQWQPHRHANQYRVIIESQLNGDKKEVRLGGSTSRHCF
NDLTPNTQYKISVHAQLQDTEGPAVTVTQRTLPVPTAPPTKPTTTTPVPTLPPAKEVCRA
AKADLVFLVDGSWSIGDDNFQKIIGFLYSTTGALDQIGPDGTQVAIAQFSDDPRTEFKLS
SYDNKETLLDAIQRITYKGGNTKTGRAMKHVKDTVFTAVGGARRGVPKVLVVLTDGRSQD
DVHLISQEIQTEGYIVFAIGFSDADYSELVSIASKPSERHVFFVDDLDAFKKIEEKLVTF
VCEAASATCPSVPMSGSTLPGFRMMEMFGLVDHMYSSVNGVSMKPGTFNSYSSYRLSSDN
PITQPTRFIHPEGLPSDYTITMLFRLLPETPKEPFALWEILNSNNEPLVGVILDNAGKTL
TFFNMDYNGDFQAVTFEGAEIQKLFYGSFHKLHIAVSKTSALVMVDCQSVGEKSINAASN
ISTDGVEVLGRTVRSRGSKDNSAPFQLQSFDIVCSTSWARRDKCCELPSLRKESDCPALP
RACTCTQDSKGPPGPPGAPGGPGIRGARGDRGEPGAVGPGGPVGDAGVPGPQGPPGPPGP
SGRSIRGPPGAPGEPGLKGDAGPPGGQGVPGTPGSAGREGPPGPRGLLGKDGPQGREGPP
GSIGGPGAPGAPGENGPPGPTGHQGPPGIPGTKGEKGERGDLQSSASVQAIARQVCEQLI
QSHMARYNSILNHVPSQPVSIRTVAGPPGEPGRQGSPGPQGEQGPPGRPGFPGSNGENGQ
PGARGPPGEKGDKGSPGVGVQGPRGAAGPPGPPGEGRTGSTGPSGRPGNPGSPGRPGIPG
AVGPPGPPGYCDQNSCLGYNVGETGYDTELTDRDVPVVQLPPSEGEGEEDDPYGSYGSYY
QPNYPVPRPVQPDDPIIDEEELRSPGIQRHARSLAGRRGRQPDTREADLS
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcgattgctgtttatcctgattgtgacatcagcactccacacacatgctcaa
gtgttgagccccagaaggctaaggtttaaagtgttgagccccggcgtactcactgtgacc
tggaataaaccaaagggagagtttgacagctacaggctggtgtacagcactgactcagga
ggatttgagcaggaggtgtctgtaaataaaaatgatcctaaagccgtcatccaagggttt
gaccccagtaaagagtacacggtgaagataaccactgttagaggaacagaggagagtaaa
cctctgatggccacatacacaggtgtagggtcagaggtgagtgaagtcagtgtacgtcag
gaccccagagaccctgaacatgacagtcagacctctgaagtggacatctttatgtgtaaa
accccagccattgcagatattgtaattctggtggatggatcatggagtatcggccgcata
aatttccgtttggtgcggatgttcctggaaagtcttgtgaaggccttctctgttggatca
gaacatgttcgcatcgggttggcccagtacagcggtgatcccaggattgaatggcattta
cacactcacaggactaaagagtctgtcatagatgctgtaaagaatctaccttataaagga
ggaaacacactcacaggtcttgctttgacatacattttggagaacagctttaagcccgaa
tcgggatccagacctgatgttcctaaaattgggattttgatcacggatggaaagtcacag
gatgatgttcattctccagctcagagactcagagattctggaattgagctgtttgctatc
ggagtgaagaacgctgatgagaacgaactgagaaccatcgcctctcctccagaagaaact
cacgtttataatgtggctgatttcagtgtgatgagctccatcgtagaggaactcaccaaa
accgtttgtgaacgggtcaatgatctcagcaaagagatcagcggtgagacagtgccgtat
tcaacgaggtcatttgatgctcccagtaatctcatcacatctgaggtcacagccagaagt
tttcgtgtgtcgtggactcatgctccaggacaagtggagaagtacagagtggtttattat
gctactaaaggatccaaacctgaggaggtggtggtaaacggggatgagaactctgtgatg
ttggactatctgaactctctgacggagtatgagatcgctgtgtttgccatctacagcaac
tcagccagtgaagctctgagaggcagcgagaccaccttggcattgccgaccgtgaataat
ctggagctgtatgacatcactcacagtacgatgcgtgtgcgctggcaagtagctgaagga
gcttctgggtacatgatcctgtatgctcctctgacacgaggagaagctgcagatgagaaa
gaggttaaggtcgatgactctgtgactcaggttgaactggaaggtttgagtcctgatact
gaatacacagtaactgtttatgggatgtatggagaggaggccagtgatcccatgacggca
cagcagaccacacttcctctgaatccacctcgtaacctgcgcatcactgacatcagtcac
agctccgctaaagtttcctgggactcagcgtctcgtaaggtcaaaggttaccgtattgtt
tatgtaaaaactgatgctgtcgagaccgatcaggttgatgtgggtccggttaccacactg
gtactacgcaacctgacttctatgacagagtacaccgttgccatcttcgccatctatgac
gagggacaatcagacccactgacagacagcttcaccaccagtgtggttcctctgcctgtg
aatctgagaagcagtgatgtgtccactgatagttttaaagtcacgtggcagcacgctgcg
tctgatgtctctgtctaccgactcatttggagacctgcagctggaggagaaactaaagag
gttctcattaatgataactctaactggtacatgatcacgggtttaaagcctctgactgaa
tatgaagtctctttgtctgggatctatagagatgaatctgagagtgatcaggtggagatc
attgaatctacagttgccagaacaacaacagctgccacaacgaccaaaagcacacctgca
gcggttgtgcgacaggctgtcaggaatcttaagctgagtgatttgacgaccttcagcatg
cgtgtgtcgtgggattcagctggaccaaatgtgcgtcagtacaaagtgtcatacatcagc
acaagaggtgaccgggccgaacagctgtcaatggttcctgcgggtcagatgtctgcggtt
cttcagcctcttctgtcagacacagagtatcgtgtcagcgtgtcagcggtctacagcgac
ggagacggtcctgtcctcacacgcgtcgcacgcacattgcctctgtctgcacccagcaac
ctccgcgtgtctgaggaatggtacaatcgcttccgaatcacatgggactcgtcctcctct
cccaccatgggataccggatcgtctaccagcccatctcagtgtctggtcgagcactggag
acgtttgtaggtgatgatgtcaacacaatgttgatcttgaatctgctgagtgggacggat
tacagcgttaaagtcatcgccacgtacactacaggatccagtgaggcgctgattggacgt
gccaaaacactttatctgggagtgaataatctcaacacataccaggtgcaggtgaccagc
atgtgtgcccagtggcagccacatcgacatgctaaccagtaccgggtcatcatcgagtca
cagctgaacggtgataaaaaggaagtgaggttgggtggctccacgtccagacactgcttt
aatgacctcactcccaacacgcagtacaagatcagcgttcacgctcagctgcaggacacg
gagggacccgccgtcaccgtcacgcagagaacacttcctgtacctacagctcctcccacc
aaacccaccaccaccacccctgtacccactttaccccctgctaaagaagtgtgccgagcg
gctaaagctgacctggtgtttctggttgatggttcatggagtattggagatgataacttc
cagaagatcattggttttctctacagcacaacaggtgctctggaccagatcggtcctgat
gggacacaggtggctatagctcagttcagtgatgatcctcgtactgagtttaaattgagc
tcatatgataataaagaaactcttctggacgccattcagagaatcacttataaaggagga
aacaccaagacaggtcgagcaatgaaacatgttaaagatactgtgtttactgcggtgggc
ggagccagaaggggcgtgcctaaagtcctggtggtgctgactgatggtcgttcccaagat
gacgttcatctcatatctcaggagatccagacagaaggttatattgtgtttgccattggg
ttttctgatgcggattacagcgagttagtgagtattgccagtaagcccagcgagaggcac
gtgttcttcgttgacgatctcgatgccttcaaaaaaatagaagagaaactcgtcaccttt
gtctgtgaggcggcatcagctacgtgtccgtctgtacccatgagtggcagcacattacca
ggcttcaggatgatggagatgtttgggttggtggatcatatgtacagcagtgttaatggt
gtctccatgaagcctggaaccttcaacagttacagcagctacagactaagcagtgacaat
ccaataacacaacccaccaggtttatccacccggagggtcttccatcagactacaccatc
acgatgcttttccggctgcttccagaaactccaaaggagccttttgcattgtgggaaatc
ctcaacagcaataatgagccattagtgggagtgattctggacaatgcaggaaagactttg
accttctttaacatggactataacggagacttccaggcggtgacttttgagggggcagaa
atccaaaaacttttttacggcagttttcacaagctgcatatcgccgtgagtaagacgtca
gctcttgtgatggttgactgtcagtcagtgggtgagaaatctattaatgctgccagtaac
atcagcactgatggtgtggaggtgttgggaagaacggttcgatccagaggctccaaggac
aactctgcaccgtttcagctgcagtcgtttgatattgtgtgcagcacatcgtgggcccga
cgggacaaatgctgcgagttgcccagtctgaggaaggagtcagattgtcccgctcttccc
cgcgcctgcacctgtacacaggacagtaagggcccacccggcccccctggagcccctgga
ggtcctggtatcagaggagctcgaggagatcgaggagaacccggagctgtgggtcctggt
ggtccagtaggtgatgctggtgttccaggtcctcagggtcctccaggtcctccgggaccc
agcggtcgctccatcagaggaccacctggggcaccaggtgagccgggactgaaaggtgat
gcaggccctccgggtggtcagggtgttccaggcactccagggtcagcaggacgtgaggga
cccccaggacctcggggtctgctaggtaaagatggtcctcagggaagagaaggacctcca
ggatctataggaggtccaggagctcccggcgctccgggtgaaaacggccctccgggtccc
acaggacaccagggacctccgggaatcccaggaactaaaggagagaagggtgagaggggt
gatcttcagtcttcagcatctgttcaggccatcgcaagacaagtgtgtgagcaactcatt
cagagtcacatggcacgttacaattccattctcaaccacgttcccagtcagccggtatcg
atccgcaccgtggccggcccacccggagagcccggacgacaaggatccccgggacctcaa
ggagagcagggtccacccgggcgacccggatttcccggcagtaatggagagaacgggcag
cccggagccagaggtcctccaggtgagaaaggagataaaggaagtccaggtgtgggagta
cagggacccagaggagctgccggtcctccaggacctcctggtgaagggagaacaggaagt
actggaccttctggtcgccctggtaaccccggtagtcctggcagacctggaattccagga
gccgtgggtccacccggaccgcccggatattgcgaccagaattcctgcttaggatacaat
gttggagaaacgggctatgacaccgagctgactgacagagatgttcctgtagttcaactg
ccaccgagcgaaggtgaaggcgaagaggacgacccgtacggcagctacggctcctactac
cagcccaactaccccgtaccccgtcctgtacagcccgacgaccccatcatagacgaggag
gagctgcgctcacccgggatacagcggcacgcacgcagcctcgcgggccgacgcggacga
cagccagacacacgagaggctgacctgtcgtaa
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