Misgurnus anguillicaudatus (oriental weatherfish): 129456025
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Entry
129456025 CDS
T09481
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129456025 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
manu03009
]
129456025 (utp18)
Ribosome biogenesis [BR:
manu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129456025 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_RIG_2nd
KNTC1_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
129456025
NCBI-ProteinID:
XP_055076799
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Position
20:complement(8162231..8177012)
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AA seq
519 aa
AA seq
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MMDSAVPFVRQKQNAKRRLSKTSDAAPHVTEEHRKQKKHAALCATLGEEDASVRLLEELV
FGADEQELTERLTEGTNTLLKDDACSISSEDDEVYPQHLAKKKAVWEDDDDDVEEDVDMT
HRFRVDYNKSEAQTKMTKQKLQQHLKEQFQKAMGGTPNWSEVTTRTGKKKDEESDDSEEL
MQRTGNFVGSSESLPKGIIKIKKCLNANNERPGDDRLTTVQFHSSAQIVMTAGLDCSISL
FQVDGKSNPKIQSIHLENFQVNKASFSADGEHIVATGLRNKLFYMYDMMEGKIIPVSTVR
GLNEQRVKDFEVSPDGKYLLLSGSSGYLHLMTMKTREVIQSVKMNGDVCSAGFTGDSSKI
FSSSVDGDVFIWDVRSSKCLKKFTDDGCVKATSLALSGDDMYLACGSQSGVVNIYSQKDC
LHNIEPKPLKAVMNLVTPATSLCFNNTSEILAIGSRAEDDANRLVHIPSFTVFSNFPQMR
KKTIFQTRCLDFSPRSGFYTVANNKGHALLFRLLHYKNF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatggactcggctgtgcctttcgttagacaaaagcagaacgcaaagcggcgtttaagt
aaaacgtcggatgcggccccacatgtcacagaggagcaccgtaaacagaagaagcacgcg
gcgctgtgcgcgaccctgggcgaggaggatgcgtctgtcaggctgctggaggagctcgtg
ttcggcgcggacgagcaggagcttacggagcgactcacagagggaaccaacactttactt
aaagacgatgcctgcagcatttcttcagaggatgatgaggtgtatccacaacatcttgca
aagaaaaaagctgtatgggaagatgacgatgatgatgtggaagaagatgtggatatgaca
catcgatttcgtgtggactataacaagagtgaagcacaaactaaaatgaccaaacagaag
ctacagcaacacttaaaggaacagtttcagaaagcaatgggtggaacaccgaactggtca
gaggtgaccacaaggacgggaaagaaaaaggacgaggaatctgatgacagtgaagaattg
atgcagcgcaccggtaactttgttggctcatctgaaagtcttcccaaaggaattattaag
attaaaaagtgcttaaatgcaaataatgaacgtccaggcgatgaccggcttacaacagta
cagtttcactcctcagctcagattgtgatgacagctggtctggattgctccatttcactc
tttcaggttgatggaaagtcaaaccccaaaatccagagcattcatctggagaattttcaa
gtgaataaggcttccttcagcgctgatggggaacacattgtggccactggactgagaaac
aaactcttctacatgtatgatatgatggaaggcaaaattatcccagtgtctactgttaga
ggactaaatgaacagagggtgaaagactttgaggtctctccagatgggaagtatcttctt
ctctctggatcttcaggatatcttcatctcatgaccatgaagactagagaagtgattcag
agcgtgaagatgaatggagatgtgtgttcagcaggtttcactggagacagcagtaagatc
ttcagtagctctgtggacggtgatgtgtttatctgggatgtgaggagcagtaaatgttta
aagaagtttacagatgatggctgtgtaaaggccacgtcactggcgctgtcaggagatgac
atgtatttggcgtgtggctctcagtctggtgtggtgaacatctattcacaaaaggattgc
ctgcacaatattgagcccaaacctctgaaggccgttatgaacctggtgacacctgccacc
tccctgtgcttcaataacacctcagagattttggccatcggatcacgagcagaggacgat
gccaaccgattggtgcacattcccagtttcacagtgttctccaactttccacaaatgaga
aaaaagacaatatttcaaactcgctgtctggatttctctccgaggagcggcttctacact
gtggccaataataaaggccatgcacttctgttcagacttctgcattataaaaacttttaa
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