Mycolicibacterium anyangense: MANY_40880
Help
Entry
MANY_40880 CDS
T07096
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
many
Mycolicibacterium anyangense
Brite
KEGG Orthology (KO) [BR:
many00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
many03019
]
MANY_40880 (hrpA)
Enzymes [BR:
many01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MANY_40880 (hrpA)
Messenger RNA biogenesis [BR:
many03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MANY_40880 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_19
NACHT
nSTAND3
T2SSE
AAA_16
SLFN-g3_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
BBZ78751
UniProt:
A0A6N4WHS1
LinkDB
All DBs
Position
4262594..4266523
Genome browser
AA seq
1309 aa
AA seq
DB search
MSERSGDERRELRELRARLDGVTIRDAARLGRRLKSLRDVTPEKIGQIAEQVAAAEALVA
TRLAAVPDITYPDLPVSERRGELAKAISDHQVVVVAGETGSGKTTQLPKICLELGRGVRG
TIGHTQPRRLAARTVAQRIADELGTPLGDAIGYTVRFTDQASDRTLVKLMTDGILLAEIQ
RDRRLLRYDTLILDEAHERSLNIDFLLGYLRELLPRRPDLKVIVTSATIEPERFAAHFSG
APIVEVSGRTYPVEIRYRPLEVAVATEEDDDPDDPDHEIVRTEMRDQTEAIVDAIIELEA
EPPGDVLVFLSGEREIRDTAEALRGLLNDPRKPTEVLPLYARLPTADQQRVFQPHTGRRI
VLATNVAETSLTVPGVRYVVDPGTARISRYSRRTKVQRLPIEPISQASAAQRAGRSGRTA
PGVCIRLYSQSDFEARPRYTDPEILRTNLAAVILQMAALQLGDIENFPFLDPPDQRSIRD
GVQLLQELGAFDASGAITDTGRRLAQLPVDPRLGRMILQADSEGCVREVLVLAAALSIPD
PRERPADREDAARQKHARFADEHSDFVSFLNLWRYLGEQRKSLSGNAFRRMCREEFLHYL
RIREWQDLTGQLRSIARDIGIRESADDEPADPSRVHAALVAGLLSHVGLREGETREYAGA
RNSKFVLAPGSVLTKRPPRWIVVADLVETSRLFGRVAARIEPETVEHVAGDLVQRTYSEP
HWDAKRGAVMAYERVTLYGLPLVVRRRVGYADVDPVVSRELFIRHALVQGEWQTRHHFFR
DNTALRAELAEIEERARRRDLLVDDDEIFAFYDKRIPADVVSARHFDGWWKKQRHRTPDL
LTFTRDDLLRVDDADTDRPDVWQAGDLALPLTYRFEPGAADDGVTVHIPVEVLARLGGDE
FGWQVPALREELVTALIRSLPKDLRRNFVPAPDTARAVLSAITPGQEPLLEALQRELHRR
TGVLVPITAFDLDKLPAHLRVTFAVQGSDGTEVARGKDLGGLQDTLAGSARRAVAQSVGI
DLERSGLRGWPEDLEDLPRTVERTVGGHLVKGYPGFVDGGAGVDIRIFATAAERDPAMAA
GLRRLVRLSVPSPVKSLEKSLDPRTRLVLGANPDGSLAALLDDCADAAVDVLATSPAWTK
SEFGALTDRVKGRLAQATGEVVARVEKVLAALHEVQVAIPDRPLPAHAQAITDIRAQLDG
LLPARFVTATGATHLADLARYLTAIVRRLERLPHALAADQDRMARVHAVADAYAELVQAL
SPARAAGSDVRDIARMIEEFRVSLWAQQLGTARPVSEQRIYRAIDAVLA
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaacggtccggcgacgagcgtcgcgagctgcgcgagcttcgtgctcggctggac
ggggtcacgattcgggacgcagcgcggcttgggcgcaggctgaagtcgctgcgcgatgtc
accccggagaagatcgggcagatcgccgagcaggtcgcggccgctgaggcgctggtggcg
acccggctggcggccgtgcccgacatcacttacccggaccttccggtcagcgagcgtcgc
ggtgagctggccaaggccatcagcgaccaccaggtggtggtggtggcaggtgagaccggg
tcgggcaagaccacccagctgcccaagatctgcctggaactgggccgcggggtgcgcggc
accatcgggcacacccagccgcgccggctggccgcccgcaccgtggcccagcgcatcgcc
gacgaactcggcaccccgctgggcgacgccatcggctataccgtccgcttcaccgatcag
gccagcgatcgcacgctggtgaagttgatgaccgacggcatcctgctcgccgagatccag
cgcgaccgaaggctgctgcgctacgacaccctgatcctcgacgaggcccacgagcgcagc
ctcaatatcgacttcctgctgggctacctgcgtgaattgctgccacgccgccccgacctg
aaggtgatcgtcacctcggcgaccatcgaaccggaacggttcgccgcacacttctccggg
gcgcccatcgtcgaagtatccgggcgcacctatccggtcgaaatccgttaccgccctttg
gaagtcgctgtcgccaccgaagaggacgacgaccccgatgatccggatcacgagatcgtg
cggaccgagatgcgggaccagacggaggcgatcgtcgacgccatcatcgaactggaagcc
gaaccgcccggcgatgtgctggtgttcctgtccggtgagcgcgagatccgcgacaccgca
gaagcgttgcgcggcttactcaatgatccgcggaagccgaccgaagtgctgccgctgtat
gcgcgcctgccgaccgccgatcagcaacgggtgttccagccgcacaccgggaggcgaatc
gtgctggcgaccaacgtcgccgagacgtcgctgacggtacccggcgtgcgttacgtcgtc
gaccccggtaccgcgcggatctcccgctacagcaggcgcaccaaggtgcagcgcctgccg
atcgaacccatctcgcaggcctcggcggcgcaacgggcggggcggtccggccgtaccgca
cccggcgtctgcatccggctgtactcgcagtccgatttcgaggctcggccccgctacacc
gacccggagatcctgcgcaccaacctcgccgcggtgatcctccagatggcggcgctgcaa
ctcggtgatatcgagaactttcccttcctcgatccaccggatcagcgcagcatccgcgac
ggggtgcaactgctccaggaactcggcgcgttcgacgcctcgggggccatcaccgacacc
ggccgccggctggcccagctgcccgtcgacccacggctgggccgaatgatcctgcaggcc
gacagcgaaggatgtgtgcgcgaggtgctggtgctcgccgccgcgctgtccatccccgac
ccgcgtgagcgcccggccgaccgggaggacgccgcgcggcagaaacacgcccgcttcgcc
gacgagcactccgacttcgtgtcgttcctgaacctgtggcgctatctcggggaacagcgc
aagtcgttgtcgggcaatgctttccgacggatgtgccgggaggagttcctgcattacctg
cgcatccgggagtggcaggacctcaccggtcaactgcgcagcatcgcccgggacatcggg
atccgggaatccgccgacgacgaacccgcagacccgtcgcgggtgcacgccgccctggtg
gcgggcctgctgtcgcatgtgggcctgcgggaaggcgagacccgggagtacgccggggcg
cgcaactccaagttcgtgttggcgcccggttcggtactgaccaagcggccgccgcgctgg
atcgtggtggccgatctggtggagaccagccgcctgttcggccgtgtcgcggcgcgcatc
gagcccgagaccgtggaacacgtcgccggagacctggtgcagcgcacctacagcgaaccg
cactgggatgccaagcgtggtgcggtgatggcctacgagcgggtcaccctctacggcctg
ccgttggtggtgcgccgacgggtcggctatgccgacgtcgatcccgtggtgtcccgggaa
ctgttcatccggcacgccctggtccagggggagtggcagacgcgccaccactttttccgc
gacaacaccgcgctgcgtgcggagttggccgagatcgaggagcgcgcccgccgccgcgac
ctgctggtcgatgacgacgagatctttgcgttctacgacaagcggattccggccgacgtg
gtctcggcccgccacttcgacggctggtggaagaagcagcggcaccgcaccccggacctt
ctgacgttcacccgcgacgacctgcttcgcgtcgacgacgccgacaccgaccgccccgac
gtgtggcaagccggtgatctggcgctgccgctgacctatcggttcgagcccggggccgcc
gacgacggggtgacggtgcacattcccgtcgaggtgctggcccgactcggtggcgacgag
ttcggctggcaggtgcctgccctgcgtgaggaactggtgactgccctgatccggtcgttg
ccgaaagacctccggcgcaactttgttcccgctccggataccgcgcgcgcggtactgtcg
gcgatcacgccgggtcaggaaccgctgctggaggcgctgcagcgcgaattgcaccgccgc
accggggttttggtgcccatcacagcgttcgacctcgacaagctgccggcccatctgcgg
gtgacgttcgccgtgcagggttcggacggaaccgaggtggcccgaggtaaggacctgggc
ggcctgcaggacacgctcgccggatcggctcgtcgcgccgtcgcccagagtgtgggcatc
gacctggagcgctccgggctgcggggctggcccgaggacctcgaggacttgccgcgcacc
gtcgaacgcaccgtcggtggccatctggtcaagggttatcccggattcgtcgatggcggc
gcgggtgtcgacatccggatcttcgccaccgccgccgagcgcgatccggcgatggccgcg
gggttgcggcggttggtgcggctgtcggtgccctcaccggtcaagtcgctggagaagagc
ctggatccgcggacccggctggtgctcggcgccaatcccgacggatcgctggccgccctg
ctcgacgactgcgccgatgctgccgtcgacgtgctggccacctcgccggcctggaccaag
tcggaattcggtgcgctgaccgaccgggtgaaaggtcggttggcccaggccaccggtgaa
gtggtcgcccgggtcgagaaggtactcgccgccctgcacgaggtgcaggtggcgatcccg
gaccggccgctcccggcgcacgctcaggcgatcaccgatatccgtgcgcaactcgacggg
ctgctccccgcgcggttcgtcaccgccaccggcgcgacacatctggcagatctggcgcgg
tatctgaccgcgatcgtccgccgcctcgaacggctgccgcacgcattggccgccgaccag
gaccggatggcccgcgtgcacgccgtcgctgatgcgtatgccgaactggtgcaagcgctt
tcacccgcgcgggcggccggttccgatgtccgtgacatcgccaggatgatcgaggagttc
cgggtcagcctgtgggcacagcagctcggcaccgcccgcccggtgagcgagcagcgcatc
tatcgggccatcgacgccgttctcgcctaa
DBGET
integrated database retrieval system
