Mycolicibacterium anyangense: MANY_49320
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Entry
MANY_49320 CDS
T07096
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
many
Mycolicibacterium anyangense
Pathway
many03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
many00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MANY_49320 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
many03021
]
MANY_49320 (rpoC)
03400 DNA repair and recombination proteins [BR:
many03400
]
MANY_49320 (rpoC)
Enzymes [BR:
many01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MANY_49320 (rpoC)
Transcription machinery [BR:
many03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MANY_49320 (rpoC)
DNA repair and recombination proteins [BR:
many03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MANY_49320 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BBZ79595
UniProt:
A0A6N4WFJ5
LinkDB
All DBs
Position
5183343..5187299
Genome browser
AA seq
1318 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDTEMRHNELSTLEAEMEVEKKAVADQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWSTFTKLAPKQLIVDENL
YREIVDRYGEYFEGSMGAESIQKLIQNFDIDAEAESLREVIRSGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAMPRLDMVTGLYYLTTHVAGSKGEYA
PAGTDAPETGVYSSPAEAIMAMDRGVLSVRAQIKVRLTQLRPPHEVETELFGENGWRPGD
AWTAETTLGRVIFNELLPQGYPFVNEQMHKKVQARIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVIVPPEKQEILERYEAEADGIEKKYQRGALNHQERNDALVELWKE
ATEEVGKALEAHYPEDNPIITIVKSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGILVD
LAERQADGTLIRDPHVETSAYARTLAADAVDEKGNVIVEAGHDLGDPAIDALLEAGISQV
KVRSVLTCGSASGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
TGGADIVGGLPRVQELFEARIPRNRAPIADVAGRVRLEESDKFYKITIVPDDGGEEVVYD
KLSKRQRLRVFKHDDGTERLLADGDHVEVGQQLMEGSADPHEVLRVEGPRKVQIHLVKEV
QEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERGEFEAENRRVVAEGA
EPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLI
PAGTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggtctggcgaccgcggacgacatc
cgcaactggtcctacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggatggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgcgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctcgggtacctgctggacctg
gccccgaaggatctcgagaagatcatctacttcgcggcctacgtgatcaccgcggtcgac
accgagatgcgccacaacgagctctccaccctcgaagccgagatggaggtcgagaagaag
gccgtcgccgatcagcgtgacgccgacctggaggcccgcgcccagaagctcgaggccgac
ctggccgaactcgaggccgagggtgccaagtccgacgtgcgccgcaaggtgcgcgacggt
ggcgagcgcgagatgcgtcagctccgtgaccgggcccagcgcgagctggaccggctcgac
gagatctggagcaccttcaccaagctggctcccaagcagctgatcgtcgacgagaacctc
taccgcgagatcgtcgaccgctacggcgagtacttcgaaggctcgatgggcgcggagtcg
atccagaagctcatccagaacttcgacatcgacgccgaggccgaatcgctgcgcgaggtc
atccgcagcggcaagggacagaagaagctccgtgccctcaagcggctgaaggtcgtcgcg
gccttccagcagtccggcaactcgccgatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcggccgatggtccagctcgacggtggccgcttcgccacctcggacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggctcaagcgactgatcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcgcatgcttcaggagtcggtcgacgcg
ctgttcgacaacggccgccgcggccgccccgtcaccggaccgggcaaccgtccgctgaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgtgtcgactactcgggccgctcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggcgctcgaactgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgtcagcgt
ccgcaggtgtgggacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcacccacgctgcaccgcctgggcatccaggccttcgagccgcagctggtggaaggcaag
gccatccagctgcacccgctggtctgtgaggcgttcaacgccgacttcgacggcgaccag
atggcagtccacctgccgctgagcgccgaggcgcaggccgaggcccgtgtgctgatgctg
tcgagcaacaacatcctgtcgccggcgtcgggcaagccgctggccatgccgcgtctggac
atggtcaccggtctgtactacctgaccacccatgtcgcgggcagcaagggcgagtacgcc
ccggcgggtaccgacgcaccggagactggcgtgtactcgagcccggccgaggccatcatg
gcgatggaccgtggcgtgctcagtgtccgcgctcagatcaaggtgcgcctgacgcagctg
cgtccgccgcacgaggtcgagaccgagctgttcggcgagaacggctggcgcccgggcgat
gcctggaccgccgagaccacgctgggtcgggtgatcttcaacgagcttctgccgcagggg
tatccgttcgtcaacgagcagatgcacaagaaggtccaggcgcggatcatcaacgatctg
gccgagcgctacccgatgatcgtggttgcgcagaccgtcgacaagctcaaggatgccggc
ttctactgggccacccgttcgggtgtcaccgtgtcgatggccgacgtcatcgtgccgccg
gagaagcaggagatcctggagcgttacgaggccgaggccgacgggatcgagaagaagtac
cagcgcggtgccctgaaccaccaggagcgcaacgacgctctggtggagctgtggaaggaa
gccaccgaagaggtcggtaaggccctggaggcgcactacccggaggacaacccgatcatc
acgatcgtgaagtccggcgcgacgggtaacttcacccagactcgcaccctggccggcatg
aagggtctggtgacgaacccgaagggtgagttcatcccgcgcccgatcaagtcctcgttc
cgtgagggcctgacggtgctggagtacttcatcaacacccacggtgcccgaaagggtctg
gcggacaccgctcttcgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtg
tctcaggacgtcatcgtccgcgagcacgactgcggcaccgagcggggcatcctggtcgat
ctggccgagcgtcaggccgacggcaccctgatccgggacccgcacgtcgagacctcggcg
tacgcccgcacgctggccgccgatgcggtcgacgagaagggcaacgtcatcgtcgaggcc
ggccacgatctgggcgacccggcaatcgacgcgctgctcgaggccggtatctcgcaggtc
aaggtgcgctccgtgctcacctgcggcagcgcctccggcgtgtgtgcgatgtgctacggc
cggtcgatggccaccggcaagctggtcgacatcggcgaggcggtcggcatcgtggccgca
cagtccatcggtgagcccggcacgcagctgaccatgcgtaccttccaccagggtggtgtt
accggtggcgccgacatcgtcggtggtctgccgcgtgtgcaggagctgttcgaggcgcgt
atcccgcgcaaccgggctccgatcgccgacgtcgccgggcgggttcgcctggaggagagc
gacaagttctacaagatcaccatcgttcccgacgacgggggcgaggaggtcgtgtacgac
aagctgtccaagcgtcagcgcctgcgcgtgttcaagcacgacgacgggaccgagcggctg
ctggccgacggtgaccacgtcgaggttggccagcagctcatggagggctcggccgacccg
cacgaggtgctccgtgtcgagggcccgcgcaaggtgcagatccacctggtcaaggaggtc
caggaggtctaccgggcgcagggtgtgtcgatccacgacaagcacatcgaggtcatcgtc
cggcagatgctgcggcgcgtcacgatcatcgattcgggtgcgacggagttcctgcccggt
tcgctgaccgagcgcggcgagttcgaggccgagaaccgtcgggtggttgccgagggcgcc
gagcccgcggctggccgtccggtgctgatgggtatcaccaaggcgtcgctggccaccgat
tcgtggctgtcggcggcgtcgttccaggagaccactcgcgtgctgaccgatgcggcgatc
aactgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatc
ccggccggtaccggtatcaaccgctaccgcaacatccaggtgcagccgaccgaagaggcg
cgggccgccgcgtacacgatcccgtcctacgaggatcagtactacagccccgacttcggc
caggccaccggtgccgcggtgccgttggacgactacggctacagcgactaccgctag
DBGET
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