KEGG   Mycobacterium avium subsp. paratuberculosis MAP4: MAP4_0366
Entry
MAP4_0366         CDS       T02662                                 
Name
(GenBank) ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mao  Mycobacterium avium subsp. paratuberculosis MAP4
Brite
KEGG Orthology (KO) [BR:mao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mao03400]
    MAP4_0366
Enzymes [BR:mao01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MAP4_0366
    5.6.2.6  RNA 3'-5' helicase
     MAP4_0366
DNA repair and recombination proteins [BR:mao03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MAP4_0366
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr DEAD WHD_4th_Lhr WHD_3rd_Lhr Helicase_C ResIII AAA_25 PhoH AAA_22
Other DBs
NCBI-ProteinID: AGL35330
LinkDB
Position
complement(416704..421344)
AA seq 1546 aa
MSTPAEPRPSRPSDPLGRFSAITREWFTSTFAAPTTAQAQAWSAIADGHNTLVIAPTGSG
KTLAAFLWALDSLAGQSERAPGTRVLYVSPLKALAVDVERNLRTPLAGLTRIAERAGLPA
PDISVGVRSGDTPPAVRRQLINRPPDVLITTPESLFLMLTSAARETLAGVQTVIVDEIHA
IAGGKRGAHLALSLERLDALREGRPAQRIGLSATVRPPEELARFLSGTAPGARTTVVAPP
SAKTVELSVQVPVPDMANLANNTIWPDVENRLVDLIEAHGSTIVFANSRRLAERLTARLN
EIHAERSGVELSATANPKVAGGAPAHIMASGQTYGVEPILARAHHGSVSKEQRALVEEDL
KRGLLKAVVATSSLELGIDMGAVDLVIQVEAPPSVASGLQRIGRAGHQVGEVSRGVLFPK
HRTDLIGCAVTAQRMLAGQIETMRVPANPLDILAQQTVAAAALEPLDADRWFETVRRAAP
FATLPRSIYEATLDLLSGKYPSTEFAELRPRLVYDRDTGTLTARPGAQRLAVTSGGAIPD
RGLFTVYLASEAEKPSRVGELEEEMVYESRPGDVISLAATSWRITEITHDRVLVIPAPGQ
PARLPFWRGDGVGRPAELGAALGAFTGELAGLSREEFDSRCAALGFDAYAVDNLYGLFDE
QRTAAGVVPTDTTLLVERFRDELGDWRVILHSPYGLGVNGPLALAVGRRLRERYGIDEKP
TASDDGVVVRLPDTVSDFASDGGDTPPGAELFVFDADEIDPIVTAEVGGSALFASRFREC
AARALLLPRRHPGRRSPLWQQRQRAAQLLEVARKYPDFPVVLETVRECLQDVYDVPALVA
LMAGIAQRRVRVLEVETQRPSPFAASLLFGYVGAFMYEGDSPLAERRAAALSLDSTLLAE
LLGRVELRELLDPEVVAATARALQHLAPERAARDAEAVADLLRLLGPLTEDEVVARAGGA
DAVEVRGWLEGLRAARRAVPVSFAGRSWWVAIEDIGRLRDGLGIAVPLGVPAAFTEEVAD
PLGELLGRYARTHTPFSTAEAAARFGLGLRVTADVLGRLADPSTSQGRLVRGDFVAARPS
EPGGVLGAEQWCDADVLRILRRRSLAALRAQVEPVSTAAYGRFLPAWHRVGAAESSRAPG
HSGLDGLMSVIEQLAGVRLPASALEPLVLAPRVRDYSPALLDELLATGEVTWSGAGSISG
SDGWIALHPSESAPLTLQGPADIELGEAHRAILDVLAGGGGYFFRQLATDGVSDAELKAA
VWELVWAGWITGDTFAPVRALLGGGGTRRRSAPAHRAQRPPRLSRYSVAHPQARPADPTV
AGRWSLLPPPEPDSTVRAHFQAELLLGRHGVLTRGAVAAEGVAGGFATLYKVLSTFEDAG
RCQRGYFIESLGGAQFAVASTVDRLRGFADGVDPQRPEYRAIVLAAADPANPYGAALPWP
ASSADGARPGRKAGALVVLVDGELAWFLERGGRSLLTFTDDPAAQHAAAAALAGLVSARR
VAAILVERIDGVPALAPRGDGAAGNDALTALADAGFARTPRGMRLR
NT seq 4641 nt   +upstreamnt  +downstreamnt
gtgagcactcccgccgagccccggccgtccaggccgtccgacccgctgggccggttcagc
gcgatcacccgggagtggttcaccagcaccttcgccgccccgaccacggcgcaggcgcag
gcctggagcgccatcgccgacggccacaacacgctggtgatcgccccgaccgggtcgggc
aagacgctggccgcgttcctgtgggccctggacagcctggccggccagtccgagcgtgcg
cccggcacccgggtgctctacgtgtcgccgctcaaggcgctggccgtcgacgtcgagcgc
aacctgcgcaccccgctggccgggctcacccgcatcgccgagcgcgccggcctgccggcc
cccgacatcagcgtcggggtgcgctccggtgacaccccgccggcggtgcgtcgccagctg
atcaaccggccgcccgacgtgctgatcaccacgccggagtcgctgtttctgatgctcacc
tcggcggcccgcgagacactggccggggtgcagacggtgatcgtcgacgagatccacgcc
atcgcgggcggcaagcgcggcgcgcacctggcgctgtcgctggagcgcctggacgcgctg
cgcgagggccggcccgcccagcgcatcgggttgtcggcgacggtgcggccgcccgaggag
ctggcccgtttcctgtccgggacggcgccgggcgcccggaccaccgtggtggccccgccg
tcggccaagaccgtcgagctgagcgtgcaggtgccggtgcccgacatggccaacctggcg
aacaacaccatctggcccgacgtggagaaccgcctggtcgacctgatcgaggcgcacggt
tcgaccatcgtgttcgccaattcgcggcggctggccgagcgactcaccgcccgactcaac
gagattcacgccgaacgcagcggcgtcgagctctccgcgaccgccaatccgaaggtggcc
ggcggcgccccggcgcacatcatggcctcgggtcagacctacggcgtggagccgatactg
gctcgggcccaccatggttcggtcagcaaggaacagcgcgcgctggtcgaggaggacctc
aaacgcggcctgctcaaggcggtggtggccacctccagcctggagttgggcatcgacatg
ggcgccgtcgatctggtcatccaggtggaggcgccgccgtcggtggccagcgggctgcag
cgcatcgggcgggccggccaccaggtcggcgaggtgtcgcgcggggtgctgttccccaag
caccgcaccgacctgatcggctgcgcggtgaccgcgcagcgcatgctggccggccagatc
gagaccatgcgggtgccggccaacccgctggacatcctggcccagcagaccgtggcggcg
gccgccctcgaaccgctggacgccgaccggtggttcgagacggtgcgccgggccgccccg
ttcgcgacgctgccgcgcagcatctacgaggccaccctggacctgctctccggcaagtat
ccgtccaccgaattcgccgagctgcgaccgcgattggtctacgaccgcgacacgggcacg
ctgaccgcgcgccccggcgcccagcggctggcagtcacctcgggcggcgccatcccggac
cgcgggctgttcaccgtctacctcgcctcggaagccgaaaagccttctcgggtaggcgaa
ctcgaagaggagatggtgtacgagtcgcggcccggcgacgtcatctcgctggccgccacc
agctggcggatcaccgagatcacccatgaccgggtgctggtgatcccggcgcccgggcag
ccggcccggttgccgttctggcgcggtgacggcgtgggccgcccggccgagctgggtgcc
gcgctcggcgcattcaccggcgaactcgccggcctgagccgggaggaattcgattcccgt
tgtgccgcactgggtttcgacgcgtacgccgtcgacaatctgtacggcctgttcgacgag
cagcgcaccgccgccggggtggtgcccaccgacaccacgttgctggtcgagcggttccgc
gacgagctcggcgactggcgggtgatcctgcactcgccgtacgggctcggcgtgaacggg
ccgctggccctggcagtgggccgccggctgcgggagcgctacggcatcgacgagaagccc
accgcgtccgacgacggcgtggtggtgcggctgccggacacggtttccgatttcgcgtcc
gacggtggcgacaccccgcccggcgcagagcttttcgtcttcgacgccgacgagatcgac
ccgatcgtcaccgccgaggtgggcggttcggcgctgttcgcgtcgcggttccgcgagtgc
gcggcgcgcgcgctgctgttgccgcgccggcaccccggccgccgctcgccgctgtggcag
cagcgccagcgcgccgcccagctgctggaagtggcccgcaaataccccgacttcccggtg
gtgctggagaccgtccgggaatgcctgcaggacgtctacgacgtgcccgccctggtcgcg
ctgatggccggcatcgcgcagcggcgggtgcgggtgctggaggtggagacgcagcggccc
tcgccgttcgcggcctcgctgctgttcggctacgtcggcgcgttcatgtacgagggcgac
agcccgctggccgagcggcgggccgccgcgctgtcgctggacagcacgctgctggccgag
ctgctgggccgggtggagctgcgcgaattgctcgaccccgaggtggtcgcggccaccgcc
cgggcgctgcagcacctggcgcccgagcgggccgcccgcgacgcggaggccgtcgccgac
ctgctgcggctgctgggcccgctcaccgaggacgaggtggtcgcccgggccggtggcgcg
gacgccgtcgaggtcaggggctggctggagggcctgcgcgcggcccggcgcgcggtgccg
gtgtcgttcgccggccgcagctggtgggtggccatcgaggacatcggccggctgcgcgac
ggcctgggcatcgcggttccgctgggcgtgccggccgcgttcaccgaggaggtcgccgac
ccgctgggcgagctgctgggccggtatgcgcgcacccacaccccgttcagcaccgccgag
gccgccgcccggttcggtctggggctgcgggtgaccgccgacgtcctgggccggctcgcc
gacccctccacttcgcagggccggctggtgcgcggcgacttcgtcgcagcgcggccgtcg
gagccgggcggagtgctcggggccgagcagtggtgcgacgccgacgtgctgcgcatcctg
cggcggcggtcgctggccgcgctgcgcgcccaggtcgagccggtcagcaccgccgcctac
gggcggttcctgccggcctggcatcgggtcggagcggccgaatcctcgcgcgcgcccggc
cattccgggctggacgggctgatgtcggtgatcgagcagctggccggggtgcggctgccg
gcttcggcgctcgagccgctggtgctggccccgcgggtgcgcgactactcccccgccctg
ctggacgaactgctggccaccggtgaggtcacctggtcgggcgccgggtccatctcgggc
agcgacggctggatcgccctgcaccccagcgagtccgcgccgctgacgctgcaggggccc
gccgacatcgagctgggcgaggcgcaccgcgccatcctggatgtgctggccggtggcggc
ggctacttcttccgtcagctggcaaccgacggggtgtccgacgccgagctcaaagccgca
gtgtgggaactggtttgggccggctggatcaccggcgacacgttcgccccggtgcgcgcc
ctgctcggcggcggcggaacgcgccggcgttcggcgccggcgcaccgcgcgcagcggccg
ccgcggctgagccggtacagcgtcgcgcacccgcaggcccgtccggccgacccgaccgtg
gccggccggtggtccctgctgccgccgcccgagccggactccacggtgcgcgcccacttc
caggccgaactgttgttgggccggcacggcgtgctgacccggggcgcggtggccgccgag
ggcgtcgcgggcgggttcgccacgctgtacaaggtgctgagcaccttcgaggacgccggc
cgctgccagcgcggctacttcatcgaatcgctgggcggggcgcagttcgccgtcgcctcc
accgtcgaccggctgcgcgggttcgccgacggggtcgacccgcaacggcccgagtatcgg
gcgatcgtgctggccgcggccgacccggccaacccgtacggcgccgcgctgccctggccg
gcgtcgagcgcggacggggcccggcccggccgcaaggccggggcgctggtggtgctggtg
gacggcgagctggcctggttcctcgagcggggcggacggtcgctgctcaccttcaccgac
gacccggccgcccagcacgccgcggcggcggcgctggccgggctggtctcggcccgtcgc
gtcgcggcgatcctggtggagcgcatcgacggggtgccggcgttggcgccgcgcggcgac
ggtgccgccggcaacgacgcgctgacggcgctcgccgacgccgggttcgcccgcaccccg
cgcggaatgcggctgcgctga

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