Mycobacterium avium subsp. paratuberculosis MAP4: MAP4_0992
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Entry
MAP4_0992 CDS
T02662
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mao
Mycobacterium avium subsp. paratuberculosis MAP4
Brite
KEGG Orthology (KO) [BR:
mao00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MAP4_0992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mao03021
]
MAP4_0992
Transcription machinery [BR:
mao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MAP4_0992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AGL35935
LinkDB
All DBs
Position
complement(1060757..1062286)
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AA seq
509 aa
AA seq
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MAATKASPATDGPVKRTATKSPSSPAKRPAAKAANGSAPAKRATKTASRSAKSEAGAAAE
PAKKTRSSAKGADAKAPSARGTKAAKGGPADPDALDTDGAVEDLDTEPDLEGEPGEDLDI
DTDLNLDDLEEDVAADDADIEPGDAEEGEDEEAAAPKAAGATVADEDDEIAEPSEKDKAS
GDFVWDEDESEALRQARRDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYA
TQLMSEMAERGEKLPAAQRRDMMWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLD
LIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKL
GRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFI
EDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVT
RERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgaccaaagcaagcccggcgacggatgggccggtgaaacgcaccgccacaaag
tctccgtcgtcccccgccaagaggccggcggccaaggccgccaatggctccgcgcccgcc
aagcgggccaccaagaccgcatcgcggtccgccaagtccgaggccggcgcggcggccgaa
cccgccaagaagacccgctcgtcggccaagggtgccgacgccaaggcgccgtcggcgcgc
gggacgaaggcggccaagggcggcccggccgatcccgacgccctcgacaccgacggcgcc
gtcgaggatctcgacaccgaacccgacctcgagggcgagcccggcgaggacctcgacatc
gacaccgacctgaacctcgacgacctcgaggaggacgtggcggccgacgacgccgacatc
gagcccggtgacgccgaggagggcgaggacgaggaagccgccgcccccaaggctgccggc
gccacggtcgccgacgaggacgacgagatcgccgagccgtccgaaaaggacaaggcctcc
ggcgatttcgtctgggacgaggacgaatccgaggcgttgcggcaggcccgcagggacgcc
gagctgaccgcgtcggccgactcggtgcgcgcctacctcaagcagatcggtaaggtcgcg
ctgctcaacgccgaggaagaggtcgagctggccaagcggatcgaggccggcctgtacgcc
acccagctgatgtcggagatggccgagcgcggcgagaagctgcccgccgcccagcgccgc
gacatgatgtggatctgccgcgacggcgaccgcgcgaaaaaccatctgctggaagcgaat
ctgcggttggtggtgtcgctggccaagcgctacacaggccgcgggatggcgttcctcgat
ttgatccaggagggcaacctgggcctgatccgtgcggtcgagaagttcgactacaccaag
ggctacaagttctccacctacgcgacgtggtggatccgtcaggccatcacccgggccatg
gccgaccaggcccgcaccatccgcatcccggtgcacatggtcgaggtgatcaacaagctg
ggccgcattcagcgcgagctgctgcaggacctgggccgcgagcccacgcccgaggagctg
gccaaggaaatggacatcacgcccgaaaaggtgctcgagatccagcaatacgcgcgcgag
ccgatctcgctggaccagacgatcggcgacgagggcgattcccagctgggcgacttcatc
gaggacagcgaggccgtggtggccgtcgacgcggtgtcgttcacgctgctgcaggaccag
ctgcagtcggtgctggagacgctgtcggagcgcgaggccggcgtggtgcggctgcggttc
ggcctgaccgacggccagccccgcaccctggacgagatcggccaggtctacggggtgacc
cgcgagcgcatccgccagatcgagtccaagacgatgtcaaagttgcgccaccccagccgt
tcccaggtgctgcgcgactacctggactga
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