Mycobacterium avium subsp. paratuberculosis MAP4: MAP4_1898
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Entry
MAP4_1898 CDS
T02662
Name
(GenBank) Exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mao
Mycobacterium avium subsp. paratuberculosis MAP4
Pathway
mao03030
DNA replication
mao03430
Mismatch repair
mao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAP4_1898
03430 Mismatch repair
MAP4_1898
03440 Homologous recombination
MAP4_1898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mao03032
]
MAP4_1898
03400 DNA repair and recombination proteins [BR:
mao03400
]
MAP4_1898
Enzymes [BR:
mao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAP4_1898
DNA replication proteins [BR:
mao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MAP4_1898
DNA repair and recombination proteins [BR:
mao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MAP4_1898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
OHCU_decarbox
Motif
Other DBs
NCBI-ProteinID:
AGL36814
LinkDB
All DBs
Position
complement(2076609..2078531)
Genome browser
AA seq
640 aa
AA seq
DB search
MLPTVTTVASDGATQLSFADVGPAFGPDEVALRDTTFVVVDLETTGGRSTSTEETAPDAI
TEIGAVKVRGGVVLGEFATLVDPQRSIPPQIMRLTGITTAMVSDAPAIDAVLPMFLEFAG
LDRGAVLVAHNAGFDVGFLRAAAQQCDIAWPRPRVLCTVRLARRVLSREEAPSVRLASLA
RLFAVTTQPTHRALDDARATVDVLHALIERVGNQGVHTYADLRGYLPDVTPTQRRKRVLA
EGLPRRPGVYLFRGPSGEVLYIGTAVDLRRRVAQYFTGADPRGRMKEMVALAGAVDHVEC
AHALEAGVRELRLLAAHAPPYNRRSRFPQRWWWVALTDEAYPRLAVVRAPRHDRAVGPFR
ARADAADTAELLARFAGLRTCTNRLGRAALHGPLCPEAEVAPCPAARGVTATQYAAAVAR
VAALIDGADNSALAAAVDQVAALAERRHFESAARLRDRTATAVETLWRGQRLRALASLPE
LVAAAPDGQGGYQLAVVRYGRLAAAGNARRGVPPMPVVDAITAAAQAIWPEPGPLGGALV
EETALIARWLEAPGVRIVRVKGTPDAAGWASPLRSAGAWAAWAAAARSARLASEQALRAS
ELLTEPHPTREQLFGRAGVDGGAGAGQPVLPGRQPFGAAG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcctaccgtcaccaccgtggcctccgacggtgcgactcagctgagcttcgccgac
gtgggaccggcgttcggccccgacgaggtcgcgctgcgcgacaccaccttcgtggtggtc
gacctggaaaccaccggcggacgcagcaccagcaccgaggaaaccgcgcccgacgccatc
accgagatcggggcggtcaaggtgcgcggcggcgtggtgctcggcgagttcgccaccctg
gtcgacccgcagcgcagcatcccgccccagatcatgcgactgaccggcatcaccacggcg
atggtgtcggacgcgccggccatcgacgcggtgctgccgatgttcctcgagttcgccggc
ttggaccgcggggcggtgctggtcgcccacaacgccggtttcgatgtcgggttcctgcgc
gcggccgcgcagcagtgcgacatcgcctggccgcgaccgcgggtgctgtgcacggtccgg
ttggcccgccgggtgctcagccgcgaggaggcccccagcgtgcggctggcctcgctggcc
cggctgttcgccgtaaccacccaacccacccaccgcgccctcgacgacgcccgggccacc
gtcgacgtgctgcacgccctcatcgagcgggtcggcaaccagggcgtgcacacctacgcc
gacctgcgcggctacctgcccgacgtgacgcccacccagcgccgcaaacgggtgctggcc
gaggggttgccgcgccggccgggggtgtacctgttccgcgggccgtcgggcgaggtgctc
tatatcggcaccgccgtcgacctgcggcgccgggtcgcccagtacttcaccggcgccgat
ccgcgcggccggatgaaggagatggtcgcgctggccggcgcggtcgaccacgtcgagtgc
gcgcacgcgctcgaggccggggtgcgcgagctgcggctgctggccgcccacgccccgccc
tacaaccggcgctcccgcttcccgcagcggtggtggtgggtggcgctcaccgacgaggcg
tacccccggctcgcggtggtccgggcgccgcggcacgaccgggccgtcgggccgttccgg
gcccgcgccgacgccgccgacaccgccgagctgctggcccggttcgccgggctgcgcacc
tgcaccaaccggctgggccgggcagcgttgcacgggccgctgtgcccggaggcggaggtg
gcgccgtgcccggccgcccgcggcgtcacggccacccaatacgcggccgcggtggcgagg
gtcgcggcgttgatcgacggcgccgacaacagcgcgctggccgccgcggtggaccaggtc
gctgcgctggccgagcggcgtcacttcgaaagcgccgcccggctgcgcgaccgcaccgcc
accgcggtcgagacgctgtggcgcggccagcggctgcgggccctggcctcgttgccggag
ctggttgccgccgcgcccgacgggcagggcggctatcagctggccgtcgtccgctacggc
cggctcgccgcggcgggcaacgcccggcgcggggtgccaccgatgccggtggttgacgcg
atcaccgctgcggcgcaagcgatttggcccgagccggggccgctgggcggcgcgctggtc
gaggagacggcgctgatcgcgcgctggctggaggccccgggggtgcgcatcgtccgggta
aagggcaccccggacgcggcgggctgggcctccccgctgcgctcggccggggcctgggcg
gcgtgggcggcggcggcgcgctcggcccggctggcaagcgagcaggccctgcgggcgtca
gagctgctgaccgaaccgcacccaacgcgcgagcagctgttcggccgcgccggagtcgat
ggcggcgctggcgcgggccagcccgtcctcccaggccggcaaccattcggcgcggctgga
taa
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