Mycobacterium avium subsp. paratuberculosis MAP4: MAP4_2505
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Entry
MAP4_2505 CDS
T02662
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mao
Mycobacterium avium subsp. paratuberculosis MAP4
Pathway
mao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MAP4_2505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mao03400
]
MAP4_2505
DNA repair and recombination proteins [BR:
mao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAP4_2505
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MAP4_2505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
AAA_25
APS_kinase
ScfRs
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
DUF1421
cobW
Motif
Other DBs
NCBI-ProteinID:
AGL37399
LinkDB
All DBs
Position
complement(2768862..2771777)
Genome browser
AA seq
971 aa
AA seq
DB search
MADRLIVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPVCGERIARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFEKLNAQGYSRVRV
DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKASAKQRLTDSVETALNLADGIVVLEFVDH
EHDAHNREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPDLVV
PDPERTLAEGAVAPWSTGHTAEYFTRMMAGLGDELGFDVDTPWRKLPAKARKAILEGSDH
QVHVRYRNRYGRTRSYYADFEGVLAFLQRKMAQTESEQMKERYEGFMRDVPCPVCEGTRL
KPEILAVTLAAGRHGKKSIAEVCELSISDCAEFLNTLTLGPREQAIAGQVLKEIQSRLGF
LLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIE
TLTRLRDLGNTLIVVEHDEDTIAHADWIVDIGPRAGEHGGQIVHSGTYAELLANQESITG
AYLSGKESIEMPAIRRPVDRRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKSTL
VNDILATVLANRLNGARLVPGRHTRVTGLDHLDKLVRVDQSPIGRTPRSNPATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTISEVLDMSIEEAAEFFEPITGIHRYLRTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRSTGRTIYILDEPTTGLHFDDIRKLLKVINGLVDKGNTVIVIEH
NLDVIKTSDWIVDMGPEGGAEGGTVVAQGTPEDVAAVPESYTGKFLAEVIGRGGAAAGAP
RRSSRRRKATA
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaccgtctgatcgtcaagggcgcccgcgagcacaacctgcgcggcgtcgacctc
gacctgccccgggatgcgctgatcgtgttcaccgggctgtcgggatcgggcaaatcgtcg
ctggccttcgacaccatcttcgccgaggggcagcggcgctacgtggagtcgctgtcggcc
tacgcccgccagttcctggggcagatggacaagccggacgtggacttcatcgaggggctg
tcgccggcggtgtccatcgaccagaagtccaccaaccgcaacccgcgctcgaccgtcggc
accatcaccgaggtctacgactacctgcggctgctctacgcccgcgcgggcaccccgcac
tgcccggtgtgcggcgagcggatcgcccggcagacgccccagcaaatcgtcgaccaggtg
ctggcgatgcccgagggcacccggtttttggtgctggccccggtggtgcgcacccgcaag
ggcgagttcgccgacctcttcgagaagctcaacgcccagggctacagccgggtccgggtc
gacggcgtggtgcatccactgaccgatccgccgaagctgaagaagcaggaaaagcacgac
atcgaggtggtggtggaccgcctcaccgtcaaggcgtccgccaagcagcggctcaccgat
tcggtggagaccgcgctgaacctggccgacggcatcgtggtgctggaattcgtcgaccac
gagcacgacgcccacaaccgcgagcagcggttctccgagaagctggcctgccccaacggg
cacgcgttggcggtcgacgacctggaaccgcggtcgttctcgttcaactcgccctacggc
gcctgcccggagtgcagcgggctcggcatccgcaaggaggtcgaccccgacctggtggtg
cccgacccggagcgcaccctggccgagggggcggtggcgccgtggtcgacgggccacacc
gcggagtacttcacccggatgatggccgggctcggcgacgagctgggcttcgacgtcgac
accccctggcgcaagctgccggccaaggcccgcaaggcgattctcgagggttccgaccac
caggtgcatgtgcgctaccgcaaccggtacggccggacccgctcgtactacgccgatttc
gagggcgtgctggcgttcctgcagcgcaagatggcccagaccgagtcggagcagatgaag
gagcgctacgagggcttcatgcgcgacgtgccctgcccggtctgcgagggcacccggctc
aagccggagatcctggccgtcacgctggccgccgggcggcacggcaagaagtccatcgcc
gaggtgtgcgagctgtccatctcggattgcgcggagttcctcaacacgctcaccctgggg
ccccgcgagcaggcgatcgccgggcaggtgctcaaggagatccagtcgcggctggggttc
ctgctcgacgtcgggctggaatatctgtcgctgtcccgcgcggcggccaccctgtccggc
ggtgaggcgcaacgcatccggttggccacccagatcgggtccggcctggtgggggtgctc
tacgtgctcgacgagccgtccatcggcctgcaccagcgcgacaaccgccggcttatcgaa
accctcacgcgattaagggatttgggtaacacgctgatcgtcgtggagcacgacgaggac
accatcgcccatgccgactggatcgtggacatcggcccgcgggccggtgagcacggcggc
cagatcgtgcacagcggaacgtatgccgagctgctggccaaccaggaatcgatcaccggg
gcctacctgtccggcaaggaaagcatcgagatgccggcgatccggcgcccggtcgaccgc
cgccgccagctcaccgtggtaggggcgcgcgagcacaacctgcgcggcatcgacgtgtcg
ttcccgctcggtgtgctgacgtcggtgacgggcgtgtcgggctcgggcaaatcgactctg
gtgaacgacatcctggcgacggtgctggccaaccggctcaacggcgcccggctggtgccg
ggccggcacacccgggtcaccgggctggaccacctggacaagctggtgcgggtggaccag
tcgccgatcgggcgcacgccgcgatccaacccggccacctacaccggcgtgttcgacaag
atccgcaccctgttcgccgccaccaccgaggccaaagtccgtggctatcaaccgggccgg
ttctcgttcaacgtcaagggcggccggtgcgaggcgtgcacgggcgacggcaccatcaag
atcgagatgaacttcctgcccgacgtgtacgtgccgtgcgaggtgtgccacggtgcccgc
tacaaccgggagaccctggaggtgcactacaagggcaagaccatctccgaggtgctggac
atgtccatcgaggaggcggcggagttcttcgagccgatcaccggcattcaccgctacctg
cgcaccctggtcgacgtcggcctgggttatgtgcggctcggccagccggcgcccaccctg
tccggcggcgaggcgcagcgcgtcaaactggccgccgaactgcagaagcgctccaccggc
cgcaccatctacatcctcgacgagcccaccacggggctgcatttcgacgacatccgcaag
ctgctgaaggtcatcaacggccttgtcgacaaaggcaacacggtgatcgtcatcgaacac
aacctggatgtgatcaagacctcggactggatcgtcgacatgggcccggagggtggggcc
gagggcggaaccgttgtcgcgcaaggcactccggaggacgtcgccgcggtgccggagagc
tacaccggcaagttcctcgccgaggtgatcggccgtggcggggcggcggccggcgccccg
cgccggtcgagccggcgccgcaaagccaccgcctga
DBGET
integrated database retrieval system
