Mycobacterium avium subsp. paratuberculosis MAP4: MAP4_2519
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Entry
MAP4_2519 CDS
T02662
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mao
Mycobacterium avium subsp. paratuberculosis MAP4
Pathway
mao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MAP4_2519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mao03400
]
MAP4_2519
Enzymes [BR:
mao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MAP4_2519
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MAP4_2519
DNA repair and recombination proteins [BR:
mao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MAP4_2519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AGL37413
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All DBs
Position
2787628..2788416
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AA seq
262 aa
AA seq
DB search
MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW
LVLPTDGPTLLIHSGMTGRPYYCADGAAEDRHQRLVVSLDQGELRYTDLRKLRGVWLADD
PDDLVPITGRQGPDALGLGLRDFRDALTARSARRRQLKSALMDQSVLAGLGNLLVDEICW
RARIRPTRAVADLDDDEVKALHRAMTQVLRTAVRHGRVPGLPRWLTGARDAPDPHCPRCG
GRLDHARVGGRTTLWCPRCQPG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgacgtggagggattccggcggcaactggccgacgcgttgccgggg
cgacgcgtccggcgggtgaaggtgcacgatcccgggatcctgcgcaacaccaccgcgacg
acgctggcccgccggctgaccgggcggcggttcgccggcccgcgacgacacggcaagtgg
ctggtgcttcccaccgacggcccgacgctgctgatccacagcggaatgaccggccgcccc
tactattgcgccgacggtgccgccgaggaccgccaccagcgcctcgtggtgtcgctggac
cagggcgaactgcgctacaccgatcttcgtaaattgcggggagtctggctggccgacgat
cccgacgatctggtgcccatcaccggccggcaaggccccgacgcgctgggtcttggcctg
cgcgatttccgcgacgcgctgacggcgcgctcggcccggaggcggcagctcaaatccgcg
ctgatggaccagtcggtgctcgccgggctgggcaacctgctggtcgacgagatctgctgg
cgggcccggatccgccccacccgcgcggtcgcggacctggacgacgacgaggtgaaggcg
ctgcaccgggcgatgacgcaggtgctgcgcaccgcggtgcggcatggccgggtgccgggc
ttgccgcgctggctcaccggcgcccgcgacgcgcccgacccgcactgcccccgctgcggc
ggccgcctggaccacgcccgggtgggcggccggaccaccctgtggtgcccgcgctgtcag
cccgggtaa
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integrated database retrieval system
