Mycobacterium avium subsp. paratuberculosis MAP4: MAP4_2525
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Entry
MAP4_2525 CDS
T02662
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mao
Mycobacterium avium subsp. paratuberculosis MAP4
Pathway
mao03030
DNA replication
mao03410
Base excision repair
mao03420
Nucleotide excision repair
mao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAP4_2525
03410 Base excision repair
MAP4_2525
03420 Nucleotide excision repair
MAP4_2525
03440 Homologous recombination
MAP4_2525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mao03032
]
MAP4_2525
03400 DNA repair and recombination proteins [BR:
mao03400
]
MAP4_2525
Enzymes [BR:
mao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAP4_2525
DNA replication proteins [BR:
mao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MAP4_2525
DNA repair and recombination proteins [BR:
mao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MAP4_2525
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAP4_2525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
NYN_YacP
DNA_pol_lambd_f
HHH_5
HEAT_EF3_N
Motif
Other DBs
NCBI-ProteinID:
AGL37419
LinkDB
All DBs
Position
complement(2793818..2796577)
Genome browser
AA seq
919 aa
AA seq
DB search
MPKVRAVPATKAATKTATKTAAGAGEEQNRPTLMLLDGNSLAFRAFYALPAENFKTRGGL
TTNAVYGFTAMLINLLRDEAPTHIAAAFDVSRQTFRSDRYPEYKANRSATPDEFHGQIDI
TKEVLAALGITVLAEPGFEADDLIATLATQAENEGYRVLVVTGDRDSLQLVSDNVTVLYP
RKGVSELTRFTPEAVVEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTASKWIAEYGS
LQALVDNVDSVRGKVGDALREHLASVIRNRELTDLIKDVPLAQTPDTLRLQPWDRDQIHR
LFDDLEFRMLRDRLFETLAAVEPEVDEGFDVRGGALEAGELAVWLAEHSSGKRFGLAVAG
THLAYDADCTALAIVSADGEGRYIDTSALDPDDEAALASWLADPGPPKALHEAKLAMHDL
AGRGWTLAGVTSDTALAAYLVRPGQRSFSLDDLALRYLRRELRAENPQQQQLSLLDDTDG
TDDQAVQTLILRAVAVLDLADALDEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLD
LLSELQSDFAHQIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELQMPKTKRTKTGYTTDA
DALQSLFDKTGHPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSS
TEPNLQNIPIRTEAGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSQDAGLIEAFNTG
EDLHSFVASRAFGVPIEEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMDA
YFARFGGVRDYLHAVVEQARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQG
SAADIIKVAMIEVDKAIKEAGLRSRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPL
DVPLEVSVGYGRSWDAAAH
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaaagtgagagccgtgcccgccacgaaagccgcgacgaaaaccgccaccaaaacc
gccgccggggccggcgaggaacaaaaccggccgacactgatgctgctggacggcaactcg
ctggcgttccgggcgttctatgcgctgcccgccgagaacttcaagacccgcggcgggctg
accaccaacgcggtctacggcttcaccgcgatgctgatcaacctgctgcgcgacgaggcc
ccgacccacatcgccgcggccttcgacgtgtcccggcagaccttccgctccgatcgctac
ccggaatacaaggccaaccgctcggcgacccccgacgagttccacggccagatcgacatc
accaaggaagtcctggcggcgctgggcatcacggtgctcgccgagccgggattcgaggcc
gacgacctgatcgccaccctggccacccaggccgagaacgagggctaccgggtgctggtg
gtcaccggcgaccgcgactcgctgcagttggtcagcgacaacgtgacggtgctctacccg
cgcaagggcgtcagcgagctgacccgcttcacccccgaggcggtcgtcgaaaaatacggg
ctgaccccccagcagtaccccgacttcgccgccctgcgcggcgaccccagcgacaacctg
cccggcattcccggtgtgggggagaagaccgcctccaagtggatcgccgaatacgggtcg
ctgcaggcgctggtcgacaacgtcgactcggtacgcggcaaggtcggcgacgcgctgcgc
gaacacctggccagcgtgatccgcaaccgcgagctgaccgatctgatcaaggacgtgccg
ctggcccagacgcccgacacgctgcggctgcagccctgggaccgcgaccagatccaccgg
ctcttcgacgacctggagttccggatgctgcgcgaccggctgttcgaaaccctggccgcg
gtggagcctgaggtcgacgagggtttcgacgtgcgtggcggcgcgctggaagccggcgaa
ctggcggtgtggttggccgagcacagctccggcaagcgcttcgggctggccgtcgccggc
acccacctggcctacgatgccgactgcaccgcgctggccatcgtctccgccgacggcgag
ggccgctacatcgacacctcggcgctggatcccgacgacgaagccgcgctggcgtcctgg
ttggccgaccccggtccgcccaaggcgctgcacgaggccaagctggcgatgcacgacctg
gccgggcggggctggacgctggccggcgtcacctccgacaccgcgctggccgcctacctg
gtgcggcccggtcagcgcagcttctccctcgacgatctcgcactgcgctatctgcgccgc
gagctgcgcgcggaaaaccctcagcagcaacagctttcgctgctggatgacaccgacggc
accgacgaccaggcggtgcagacgctgatcctgcgggcggtggcggtgctggatctggcc
gacgcgctcgacgaggaactggcccgcatcaactccacctcgctgttgagcggcatggag
ctgccggtgcagcgggtgctcgccggaatggaaaacgccggtatcgcagtcgatttggac
ttgctcagcgagttgcagagcgatttcgcccaccagatccgcgacgcggccgaggcggcg
tacgcggtgatcggcaagcagatcaacctcggctcgccaaaacagttgcaggcggtgctc
tttgacgagcttcagatgccgaagaccaaacgcaccaagaccggctacaccaccgacgcg
gatgccctgcagtcgctgttcgacaagaccggccacccgttcctgcagcatctgctggcc
caccgggacgccacccggctcaaggtcaccgtcgacgggctgctcaactcggtggcctcc
gacgggcgcatccacaccaccttcaaccaaaccatcgcggcgacgggccgattgtcgtcg
accgagccgaacctgcagaacattccgatccgcaccgaggcgggccggcggatccgcgac
gcgttcgtggtcggcgacggttatgccgagctgatgaccgccgactacagccagatcgag
atgcggatcatggcccacctgtcccaggacgccgggctgatcgaagccttcaacacgggg
gaggacctgcactcgttcgtggcctcccgcgccttcggggtgcccatcgaggaggtcacc
ggcgagctgcgccgccgggtcaaggccatgtcctacgggctggcctacgggctgagcgcc
tacgggctgtcgcaacagctcaagatctccaccgaggaggccaaggagcagatggacgcc
tacttcgcccggttcggcggggtgcgcgactacctgcacgccgtcgtcgaacaggcccgc
aaggacggctacacctcgacggtgctgggccgccgccggtacctgcccgagctcgacagc
agcaaccggcaggtgcgcgaagccgccgagcgggcggcgctgaatgcgcccatccagggc
agcgccgccgacatcatcaaggtggccatgatcgaggtcgacaaggcgatcaaggaggcg
ggcctgcggtcgcggatcctgttgcaggtgcacgacgagctgctcttcgaggtcgcggcc
ggcgagcgggagcagctggaggcgctggcccgcgacaagatgggcggcgcctacccgctc
gacgtcccgctggaggtgtccgtgggctacggccgcagctgggacgctgcggcgcattga
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