Mycobacterium avium subsp. paratuberculosis MAP4: MAP4_3443
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Entry
MAP4_3443 CDS
T02662
Name
(GenBank) DNA topoisomerase I TopA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mao
Mycobacterium avium subsp. paratuberculosis MAP4
Brite
KEGG Orthology (KO) [BR:
mao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mao03032
]
MAP4_3443
03400 DNA repair and recombination proteins [BR:
mao03400
]
MAP4_3443
Enzymes [BR:
mao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MAP4_3443
DNA replication proteins [BR:
mao03032
]
Prokaryotic type
DNA Topoisomerases
MAP4_3443
DNA repair and recombination proteins [BR:
mao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MAP4_3443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AGL38307
LinkDB
All DBs
Position
complement(3756990..3759788)
Genome browser
AA seq
932 aa
AA seq
DB search
MADPKLKENTSGGNGSRRRLVIVESPTKARKLASYLGSRYIVESSRGHIRDLPRAAADVP
AKYKSEPWARLGVNVDADFEPLYIISPEKKHTVSELKGLLKDVDELYLATDGDREGEAIA
WHLLETLKPNIPVKRMVFHEITEPAILEAAENPRDLDIDLVDAQETRRILDRLYGYEVTP
VLWKKVAPKLSAGRVQSVATRIIVQRERDRMAFRSASYWDIVAQLDASVSDPQASPPTFA
ARLTSVDGLRVATGRDFDSQGQLRKADEVIVLDEPQATELAAGLQGAQLSVASVEEKPYT
RRPYAPFMTSTLQQEAGRKLRFSAERTMSIAQRLYENGYITYMRTDSTTLSGSAINAART
QARQLYGEEYVSPSPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGDEFRLYELI
WQRTVASQMADARGTTLSLRIGGQAGDRQVVFSASGRTITFAGFLKAYVETVDELAGGEA
DDAESRLPQLTQGQRLDAIELTPDGHATNPPPRYTEASLVKALEELGIGRPSTYSSIIKT
IQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDAIASGQERRTDW
LNNFYFGGEHGVADSIARSGGLKKLVGVNLEGIDAREVNSIKLFDDEQGRPVYVRVGKNG
PYLERMVTGDDGEPTPQRANLNDSLTPDELTLEVAEQLFATPQEGRVLGVDPATGHEIVA
KDGRYGPYVAEVLPEPPPDDDDGSGAPAKKGKKPTGPKPRTASLLRTMDLQTVTLEDALR
LLSLPRVVGVDPETGEEITAQNGRYGPYLKRGNDSRSLASEEQLFDITLEEALKIYAEPK
RRGRQGAAAPPLRELGADPATGKPMVIKDGRFGPYVTDGETNASLRKGDDVMSLTDQRAA
ELLADRRARGPAKRTAKKTSRKAPAKKAAKRG
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacccgaaactgaaggaaaacaccagcggcgggaacggcagccgccggcgactc
gtgatcgtcgagtcgcccaccaaggcgcgcaaactggccagctacctgggctcgcggtac
atcgtcgagtcgtcgcgcgggcacatccgcgacctgccccgggccgcggccgacgtgccg
gcgaaatacaagtcggagccgtgggcgcggctcggcgtgaacgtcgacgccgacttcgag
ccgctgtacatcatcagcccggagaagaagcacaccgtcagcgagctcaagggcctgctc
aaggacgtcgacgagctctacctggccacggacggcgaccgcgagggcgaggccatcgcc
tggcacctgctggaaaccctcaaacccaacattccggtcaagcggatggtgttccacgag
atcaccgagccggccatcctggaggccgccgagaaccctcgcgacctggacatcgacctg
gtcgacgcgcaggagacccggcgcatcctggaccggctgtacggctacgaggtcaccccg
gtgctgtggaagaaggtcgcgcccaagctgtcggcgggccgggtccagtcggtggccacc
cggatcatcgtgcagcgcgagcgcgaccggatggcgttccgcagcgcgtcctactgggac
atcgtggcccagctggacgccagcgtgtccgacccccaggcctccccgcccaccttcgcg
gcccggctgaccagcgtagacggcctgcgggtggcgaccgggcgggacttcgactcgcag
ggtcagctgcgcaaggccgacgaggtgatcgtgctcgacgagccccaggcgaccgagctg
gccgccgggctgcagggcgcccagctgtcggtggcctcggtggaggaaaagccctacacc
cgccggccgtacgcgccgttcatgacgtcgacgctgcagcaggaggccggccgcaagctg
cggttctccgccgagcgcaccatgagcatcgcccagcggctctacgagaacggctacatc
acctatatgcgtaccgactcgaccacgctgtcgggttcggccatcaacgccgcgcgcacc
caggcgcgtcagctctacggcgaggagtacgtctcgccgtcgccgcgccagtacacccgc
aaggtgaagaacgcgcaggaggcgcacgaggcgatccgtccggccggcgagacgttcgcc
accccggacgcggtgcgccgcgagctcgacggcgacgagttccggctctacgagctgatc
tggcagcgcacggtggcctcccagatggccgacgcgcgcggcaccacgctgagcctgcgg
atcggcggccaggccggggaccggcaggtggtgttctccgcgagcgggcgcaccatcacc
ttcgcgggttttttgaaggcctacgtggagaccgtcgacgagctggccggcggcgaggcc
gacgacgccgagagccggctgccgcagctgacccagggccagcggctggacgccatcgag
ctcacccccgacggccacgccaccaacccgccgccgcgctacaccgaggcgtcgttggtc
aaggcgctcgaggagctgggcatcggccgcccgtcgacctactcgtcgatcatcaagacc
atccaggaccgcggctatgtgcacaagaagggcagcgccctcgtgccgtcctgggtcgcg
ttcgccgtcaccggtttgctggagcaacatttcggccggctggtggactacgacttcacc
gccgcgatggaagacgagctggatgcgatcgcctcgggccaggagcggcgcaccgactgg
ctgaacaacttctacttcggcggcgagcacggcgtggccgactcgatcgcccgctccggc
ggcctgaagaaactcgtcggcgtcaacctggagggcatcgacgcccgagaagtcaactcc
atcaagctctttgacgacgagcagggccgccccgtctacgtccgggtgggcaagaacggg
ccctacctggagcggatggtgaccggcgacgacggcgagcccaccccgcagcgggccaac
ctcaacgactcgctgacccccgacgagctcaccctcgaggtggccgagcagctgttcgcc
acgccgcaggagggccgggtgctgggggtggatccggcgaccggccacgagatcgtcgcc
aaggacggccgttacgggccgtatgtggccgaggtgctgcccgagccgccgcccgacgat
gacgacggcagcggcgcgcccgccaagaagggcaagaagcccaccgggcccaagccgcgc
accgcgtcgctgctgcgcaccatggacctgcagacggtcaccctcgaggacgcgctgcgc
ctactctcgctgccccgggtggtgggggttgaccccgagaccggtgaggagatcaccgcg
cagaacggccgctacggcccatacctgaagcgcggcaacgactctcgctcgctggcctcc
gaggagcagctgttcgacatcaccctcgaggaagcgctgaagatctacgccgagcccaaa
cgccgcggccggcagggcgccgccgcgccgccgctgcgggagctgggcgccgatccggcg
accggtaagccgatggtgatcaaggacggccggttcgggccgtacgtcaccgacggcgag
acgaacgcgagcctgcgcaagggcgacgacgtcatgtcgctcaccgaccagcgcgccgcc
gagctgttggccgaccgcagggcgcgcggcccggcgaagcggaccgccaagaaaaccagc
cgcaaggccccggccaagaaggcggccaagcgcggttag
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