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Description |
Apoptosis is a genetically programmed process for the elimination of damaged or redundant cells by activation of caspases (aspartate-specific cysteine proteases). The onset of apoptosis is controlled by numerous interrelating processes. The 'extrinsic' pathway involves stimulation of members of the tumor necrosis factor (TNF) receptor subfamily, such as TNFRI, CD95/Fas or TRAILR (death receptors), located at the cell surface, by their specific ligands, such as TNF-alpha, FasL or TRAIL, respectively. The 'intrinsic' pathway is activated mainly by non-receptor stimuli, such as DNA damage, ER stress, metabolic stress, UV radiation or growth-factor deprivation. The central event in the 'intrinsic' pathway is the mitochondrial outer membrane permeabilization (MOMP), which leads to the release of cytochrome c. These two pathways converge at the level of effector caspases, such as caspase-3 and caspase-7. The third major pathway is initiated by the constituents of cytotoxic granules (e.g. Perforin and Granzyme B) that are released by CTLs (cytotoxic T-cells) and NK (natural killer) cells. Granzyme B, similarly to the caspases, cleaves its substrates after aspartic acid residues, suggesting that this protease has the ability to activate members of the caspase family directly. It is the balance between the pro-apoptotic and anti-apoptotic signals that eventually determines whether cells will undergo apoptosis, survive or proliferate. TNF family of ligands activates anti-apoptotic or cell-survival signals as well as apoptotic signals. NGF and Interleukin-3 promotes the survival, proliferation and differentiation of neurons or hematopoietic cells, respectively. Withdrawal of these growth factors leads to cell death, as described above.
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Class |
Cellular Processes; Cell growth and death
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Pathway map |

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Disease |
H00108 | Autoimmune lymphoproliferative syndromes |
H00265 | Hereditary sensory and autonomic neuropathy |
H00540 | Osteoporosis, lymphedema, anhydrotic ectodermal dysplasia with immunodeficiency (OLEDAID) |
H00721 | Pyogenic bacterial infections, recurrent, due to MYD88 deficiency |
H00912 | Tumor necrosis factor receptor-associated periodic syndrome |
H01007 | Choroid plexus papilloma |
H01969 | X-linked lymphoproliferative syndrome |
H02434 | Diffuse large B-cell lymphoma, not otherwise specified |
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Other DBs |
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Reference |
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Authors |
Savitskaya MA, Onishchenko GE |
Title |
Mechanisms of Apoptosis. |
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Reference |
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Authors |
Schleich K, Lavrik IN |
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Mathematical modeling of apoptosis. |
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Reference |
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Authors |
Lavrik I, Golks A, Krammer PH |
Title |
Death receptor signaling. |
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Reference |
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Authors |
Jin Z, El-Deiry WS |
Title |
Overview of cell death signaling pathways. |
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Reference |
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Authors |
Benn SC, Woolf CJ |
Title |
Adult neuron survival strategies--slamming on the brakes. |
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Reference |
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Authors |
Orrenius S, Zhivotovsky B, Nicotera P |
Title |
Regulation of cell death: the calcium-apoptosis link. |
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Reference |
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Authors |
Clarke P, Tyler KL |
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Apoptosis in animal models of virus-induced disease. |
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Authors |
Wen X, Lin ZQ, Liu B, Wei YQ |
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Caspase-mediated programmed cell death pathways as potential therapeutic targets in cancer. |
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Reference |
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Authors |
Shalini S, Dorstyn L, Dawar S, Kumar S |
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Old, new and emerging functions of caspases. |
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Reference |
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Authors |
Philchenkov A |
Title |
Caspases: potential targets for regulating cell death. |
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Reference |
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Authors |
Stroh C, Schulze-Osthoff K |
Title |
Death by a thousand cuts: an ever increasing list of caspase substrates. |
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Reference |
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Authors |
Safa AR |
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c-FLIP, a master anti-apoptotic regulator. |
Journal |
Exp Oncol 34:176-84 (2012) |
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Authors |
Jeong SY, Seol DW |
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The role of mitochondria in apoptosis. |
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Authors |
Parsons MJ, Green DR |
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Mitochondria in cell death. |
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Authors |
Strasser A |
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The role of BH3-only proteins in the immune system. |
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Schonthal AH |
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Endoplasmic reticulum stress: its role in disease and novel prospects for therapy. |
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Authors |
Malhi H, Kaufman RJ |
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Endoplasmic reticulum stress in liver disease. |
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Authors |
Malhotra JD, Kaufman RJ |
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The endoplasmic reticulum and the unfolded protein response. |
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Authors |
Wu J, Kaufman RJ |
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From acute ER stress to physiological roles of the Unfolded Protein Response. |
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Authors |
Repnik U, Stoka V, Turk V, Turk B |
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Lysosomes and lysosomal cathepsins in cell death. |
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Authors |
Cesen MH, Pegan K, Spes A, Turk B |
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Lysosomal pathways to cell death and their therapeutic applications. |
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Authors |
Dashzeveg N, Yoshida K |
Title |
Cell death decision by p53 via control of the mitochondrial membrane. |
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Bouchier-Hayes L, Green DR |
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Caspase-2: the orphan caspase. |
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Baptiste-Okoh N, Barsotti AM, Prives C |
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A role for caspase 2 and PIDD in the process of p53-mediated apoptosis. |
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Authors |
Aggarwal BB |
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Signalling pathways of the TNF superfamily: a double-edged sword. |
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Authors |
Steelman LS, Pohnert SC, Shelton JG, Franklin RA, Bertrand FE, McCubrey JA. |
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JAK/STAT, Raf/MEK/ERK, PI3K/Akt and BCR-ABL in cell cycle progression and leukemogenesis. |
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Authors |
Dragovich T, Rudin CM, Thompson CB |
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Signal transduction pathways that regulate cell survival and cell death. |
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Authors |
Sofroniew MV, Howe CL, Mobley WC |
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Nerve growth factor signaling, neuroprotection, and neural repair. |
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Authors |
Kristiansen M, Ham J |
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Programmed cell death during neuronal development: the sympathetic neuron model. |
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Authors |
Logue SE, Martin SJ |
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Caspase activation cascades in apoptosis. |
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Authors |
Boivin WA, Cooper DM, Hiebert PR, Granville DJ |
Title |
Intracellular versus extracellular granzyme B in immunity and disease: challenging the dogma. |
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Reference |
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Authors |
Cullen SP, Brunet M, Martin SJ |
Title |
Granzymes in cancer and immunity. |
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Related pathway |
map04141 | Protein processing in endoplasmic reticulum |
map04650 | Natural killer cell mediated cytotoxicity |
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KO pathway |
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LinkDB |
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