Marinobacter nauticus VT8: Maqu_0012
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Entry
Maqu_0012 CDS
T00454
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Maqu_0012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_0012
Enzymes [BR:
maq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Maqu_0012
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Maqu_0012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABM17120
UniProt:
A1TWK1
LinkDB
All DBs
Position
complement(20206..23799)
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AA seq
1197 aa
AA seq
DB search
MADSTAIEPGFHAIHANHLEDLRRAVVYICRQNPMPPLQSETFLVQSNGIAQWLKLALAE
KRTEDGVEGGLGIAAGMDFLFPARFIWQAYRAVLPDGEVPEQSPFDKRRLVWRLYRLLPE
LVGQDEAFTPLARFLDGRDTDLRNFQLAEKVADLFDQYQVFRADWLAAWEQGKDVVITAR
GEEKALDTEACWQPLLWRKLVEDVGSEAHTSRSQIHTRFMAQGQHISEPANASRLPKRIV
VFGVSSLPRQALEALYVLSRFSQVVLCVHNPCQFYWADIISDRELLKAERKRGAAHPVLS
QIDDPDQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDDYRASFQTPGQKIDIFTDHGDVD
NPCLLHQLQNDIHNLTPLQEIRQQQRTVDLTRDHSVVFHDAHGPQREVEILHDQLLAAFN
ADPTLRPRDVIVMVPDINVYAPHIQAVFGRYSPGRKRHIPFTISDQGQRHHEPVLIALET
LMSLPRSRFGVSEIISLLEVAGIRDRFDISEDDIPLARRWVEGANIRWGLHGKHRESLDL
PAELERNTWQAGLRAMLLGYGMGDDQPWGGVEPYGEIGGLQASLAGRLGEFVHQLEALWQ
ALQATRTPGEWEALFSAMLEQFFHKVEGQDLLLLNRFRRQLEQWLDDALAAGLEQQPLPL
NIVKDVLLQGLDEGGLNQRFLAGKVNFATLMPMRAIPFRKVCLLGMNDGDYPRSRPPVDF
DLMAQDYRPGDRSRREDDRYLFLEALLSAREQLYISWVGRSIRDDSERPPSVLISQLQDH
LNSLWKVAGQPDGSVTKALTTQHPLQPFSRDYFPRTNGVGDGEETQPKPLADVLQARGLF
TYEREWRSAHAVDNPEQSREALPYQTPEEPISLTELANFLKKPIDTFYQRRLQVRFEAVE
EDDTDNENFDLNGLDRWRLDNELIHEGVVKAASEEELHERLEATLDRMARRGDLGMGVTE
HRLRTELAGRLPDLFQRYRGALAEWPEAVAEPLPFEFRYSDSTGAVEVADLIDNLRCNPA
GQLCRLVIASSGLLTGSGYSKKVRYANLLRDWLVHLAGQLSGQPFETVILGKEEGRKFRF
PVMAPEQAQKHFEAILGRWMEATTRTLPIHCEAGFAWITSFYGGKKSVGDHERAISEAEQ
AYSTALDRDTGYLLGAFESPEALMASGEFEALLHQLYVPLWEAEQGKSAAEQIGSME
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccaccgccatcgaacccggctttcatgccatccacgccaaccacctggaa
gacctgcgccgcgccgtggtctatatctgccggcagaaccccatgccgccgctacagagc
gagacctttctggtgcagagtaacggcattgcccagtggctgaagctggcgctggcggag
aagcgcaccgaggatggcgtggaaggcggcctgggcattgccgccggcatggatttcctg
tttccggcacggttcatctggcaggcctaccgggcggtgttgcccgacggcgaagtaccg
gagcagtcacccttcgacaagcgccgtctggtctggcggctgtaccgattgttgccggag
ctggtggggcaggatgaggcgttcacaccactggcgcgattcctggacggccgcgatacc
gatctgcgcaatttccagctggcggagaaagtggcggatctgttcgaccagtaccaggtg
ttccgggccgactggctcgcggcctgggagcaaggcaaggacgtggtaatcacggcccgg
ggcgaggaaaaagcgctggatacggaagcctgctggcagcccctgctctggcgcaagctg
gtcgaggacgtgggcagcgaggcccacaccagccgttcgcaaatccacacccgctttatg
gcccagggccagcacatcagcgaaccggccaatgccagtcgcttgcccaagcgcatcgtg
gtgttcggagtatcgtcgctgccccggcaggcgctggaagccctgtatgtactgagccgg
ttcagccaggtggtgctgtgcgtccacaacccctgccagttctactgggccgacatcatc
agcgaccgggaactgttaaaagccgaacgcaagcggggcgcagcacacccggtgttgtcg
caaattgacgacccggaccagttgcaccagcacgccaacccgttgctggcggcctgggga
aaacagggccgggactacattcgcctgctggatgagttcgacaacccggacgactaccgc
gccagtttccagacgccgggccagaagatcgacatcttcaccgaccatggcgatgtggat
aacccctgcctgctgcaccagttgcagaacgatatccacaacctgacgccgctgcaggaa
atccgccagcagcagcgcacggtggatctgacccgcgaccattccgtggtgttccacgac
gcccacggcccccagcgggaagtggagattctgcacgaccagctgctggctgcgttcaat
gccgatccgacactgcggccccgggatgtaattgtgatggtgcctgacatcaacgtgtac
gcgcctcatattcaggcggtgttcggtcgctactcgccgggccgcaagcgccacattccg
ttcaccatttccgaccagggacagcgccaccacgaacccgtgctgattgccctggaaacc
ctgatgtcattgccccgaagccgcttcggtgtgagcgaaatcatcagcttgctggaagta
gccggcatccgcgaccgctttgacatcagcgaagacgacatccctctggcccggcgctgg
gtggaaggcgccaacattcgctggggcctgcatggcaagcaccgggaaagcctggacctg
ccggcagagctggaacgcaacacctggcaagccgggctgcgcgccatgttgctgggttat
ggcatgggcgatgaccagccctggggcggggtagagccctatggtgaaatcggcggcctg
caagccagcctggccggtcgcctgggcgaattcgtgcaccagctggaagccctgtggcag
gcactgcaggccacccgcacgcccggggaatgggaagccctgttctccgccatgctggag
cagtttttccacaaggtggaaggccaggacctgctgttgctaaaccgcttccgccgtcag
ttggagcagtggctggacgatgccctggccgccggactggaacagcaaccgctgcccctg
aatatcgtcaaggatgtgctactgcagggcctggatgagggcggcctgaaccagcgtttc
ctcgccggcaaggtcaacttcgccaccctgatgccgatgagggccattccgttccgcaag
gtatgcctgctgggcatgaacgacggcgactatcctcgctcccggccgccggtggatttc
gacctgatggcccaggattaccggccgggggaccgctcccgccgggaagacgaccgctac
ctgtttctggaagccttgttgtccgcccgggaacagctgtacatcagttgggtggggcgc
agtatcagggacgactctgaacggccaccctcggtgctcatcagccagttacaggaccat
ctgaacagtctgtggaaagtagcggggcaaccggatggttctgttaccaaggctctgacc
acccagcatccgctgcagcctttcagccgggactatttccccagaaccaacggcgtgggc
gacggtgaagagacccaacccaaacccctggccgatgtgctgcaggcccggggactgttc
acctatgaacgggaatggcgcagcgctcatgccgtggataacccggagcagagccgggaa
gcgctgccgtaccagacgcccgaagagcccatcagcctgaccgagctggcgaatttcctg
aaaaagcccatcgacaccttctaccagcgccggctgcaggtacgctttgaagcggtggaa
gaagacgacaccgataacgaaaacttcgacctgaacggcctggaccgctggcgcctggac
aacgagctgatccatgagggtgtcgtcaaagcggccagtgaagaggagttgcacgaacgc
ctggaagccactctggaccgtatggcccggcggggcgatttgggtatgggggtaaccgaa
catcgcctgcgcaccgagctggccggccgcctgccagacctgtttcaacgctaccgcggc
gcgctggccgagtggccggaagcagtggccgagcccttaccgttcgagtttcggtactcg
gatagcacaggcgcggtggaggtggccgatttaatcgacaacctgcgctgcaaccccgca
gggcagctgtgccggctggtgatcgccagctccggcctgcttaccggctccggttactcg
aaaaaagtccgctacgccaacctgctgcgggactggttggttcacctggccgggcaactc
agtggccagccctttgaaaccgtgatcctgggcaaggaagaaggccgtaaattccgcttc
ccggtcatggccccggagcaggcacaaaagcacttcgaagccattctgggccgctggatg
gaagccaccacccggaccctgcccattcactgcgaagccggctttgcctggatcaccagt
ttctatggcggcaagaaatctgtcggcgaccacgaacgggccattagcgaagcagaacag
gcctattccaccgccctggaccgggacaccggctacctgctgggtgccttcgaaagtccc
gaggcactgatggcgagcggcgagtttgaagccctgctgcaccagctttatgtgcctctg
tgggaggccgaacagggcaagtcggcggcggagcaaatcgggagcatggaatga
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