Marinobacter nauticus VT8: Maqu_0559
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Entry
Maqu_0559 CDS
T00454
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Maqu_0559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maq03019
]
Maqu_0559
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_0559
Enzymes [BR:
maq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Maqu_0559
Messenger RNA biogenesis [BR:
maq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Maqu_0559
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Maqu_0559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ABM17660
UniProt:
A1TY41
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All DBs
Position
634382..636478
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AA seq
698 aa
AA seq
DB search
MNRTDAEALLRTAVGNAAASFRSGQWEAINALVNQRQKLLVVQRTGWGKSSVYFIATRIM
RDQGYGPTIIVSPLLALMRNQIESARRLGIHAITINSTNRDQAEALIQQVHTNQVDCLLI
SPEKLANEQFVEQALHPILDNVGLLVVDEAHCISDWGHDFRPDYRRLLNILRQMPPNMPV
LGTTATANDRVITDVLDQLGDIEVLRGPLVRDSLSLQNIVLADQASRLAWLSETIPTLQG
AGIVYVLTKRDAEQVKSWLLSQGIDAKAYYSGIEHSDFENSDQYREHLEDLLLNNQLKVL
VATTALGMGYDKPDLHFVIHYQTPGSIVSYYQQVGRAGRGIDESLGILLSGAEDERIHDF
FRRSAFPNQPQINQVLSVLEDSDGLSVPKLEERLNMRKGQIEKVLKFLSVETPAPVYKAG
SQWTRTPVAYQLDHDQVQRLTNMREQEWQEIQEYTTTSGCLMEYLRRSLDDPEAQPCGKC
ANCLGAPLVSASPDRQRVIAAAQFLRHSEFVFKPRVQVAANGFPQYGLRGNLPQNLRAQE
GRVLSRWADAAWGGLVEQDKHGGYFRDELVDAMAEMIQQRWQPTPRPEWVTCVPSLKHPE
LVPDFARRLANKLGLPFHPVISKVQDNEPQKLQNNRYHQCSNLDGVFAVDAGLPSGPVLL
VDDVVDSGWTMTVLAALLRQQGSGEVYPVALASSATGD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaccgatgccgaagcattgctgcgtactgcggtgggaaacgcagccgcaagc
ttccgtagtggccaatgggaagccattaatgctctggtaaatcagcgccaaaagctactg
gtggttcaacgaaccgggtggggcaaaagctctgtctatttcatagcgacccgaatcatg
cgtgatcagggctatgggcccaccatcattgtctcgcctttgctggccttgatgcgtaat
cagattgaatcagctcgaagactgggtattcacgcgatcaccatcaactctaccaaccgt
gatcaagcggaagcattgatccagcaggtacatacaaaccaggtggattgtttgttgatc
tcaccggaaaagctggccaacgagcagtttgttgagcaagcgctccaccctattctggat
aacgtagggttattggttgtggatgaagcgcactgtatctcggactgggggcacgacttt
agaccggattatcgtcgcctgctcaatattttgcgccagatgccccccaacatgccggta
ttaggtacaacggccaccgccaatgatcgggtcattacagatgttttagatcagctgggt
gatattgaggtgctccgcggccctttggttcgcgatagcttgtcccttcaaaacattgtc
cttgcagatcaggcaagtcgtctcgcctggctgtcagaaacaataccgactctgcagggg
gctggaatcgtctatgtgcttacaaagcgagatgcagaacaggtaaaaagctggctgttg
agtcagggaattgatgccaaggcctactacagcggcattgagcattctgatttcgagaac
tccgatcagtaccgggagcatctggaagatctgctgctcaacaatcagctgaaggtgctt
gtagccacgacggcactgggaatgggttacgacaaacccgatcttcactttgttattcac
taccaaacaccgggatcaatcgtatcctattaccagcaagtaggccgggccgggcgcggt
attgacgagtctctcggcattctactttcaggggcggaggatgagcgtattcacgacttt
ttccgtcgctccgcatttccgaatcagccccagattaaccaggtgctttccgttctcgaa
gacagtgatggcttatctgtaccgaaactggaagaacgcttgaatatgcgcaaagggcaa
atcgaaaaagtccttaaatttctgagcgtggagacccctgcgcctgtatacaaagcgggc
agccaatggacaagaacaccggttgcttaccagctagatcatgaccaagtccagcggctc
acgaacatgcgagagcaggagtggcaagaaatccaggagtacacgacaacttcgggctgc
ttgatggaatatctgcgaaggtctcttgatgacccggaggcgcaaccctgtggcaagtgc
gctaactgtcttggtgcgccgctggtcagtgcctcgcccgatcgccaaagagtcattgct
gcagcgcagttccttcgccactcagaattcgttttcaagcccagggttcaagtggccgcc
aatgggtttccgcaatacggattgcgagggaacctgccacaaaacctcagagcgcaggaa
ggcagagtacttagtcggtgggctgacgcagcatggggcggtttggtcgaacaggacaaa
catgggggctatttccgggatgaattagtggacgccatggcggaaatgattcagcagcgt
tggcagccaacgccacggcctgagtgggtcacctgcgtaccctcgctcaagcaccccgaa
ctggtgccggattttgcgcggcggctggcgaataaactgggtctgccattccatccggta
atctccaaagtgcaagataacgaaccacaaaaactacagaacaaccgctatcaccagtgc
agcaacctggatggagtgttcgcggttgatgcaggcctcccttccggcccagtcctattg
gtggacgatgtcgtcgattccggttggaccatgaccgtactggcagccttacttcggcaa
caaggaagtggcgaagtctatccggtcgctcttgcctcttctgcaacgggagattga
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