Marinobacter nauticus VT8: Maqu_0712
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Entry
Maqu_0712 CDS
T00454
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Maqu_0712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maq03021
]
Maqu_0712
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_0712
Enzymes [BR:
maq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Maqu_0712
Transcription machinery [BR:
maq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Maqu_0712
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Maqu_0712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
ABM17809
UniProt:
A1TYJ0
LinkDB
All DBs
Position
817511..821587
Genome browser
AA seq
1358 aa
AA seq
DB search
MTYSYTEKKRIRKDFSKLPSVMEVPYLLSIQLDSFRDYLQMETAPEDRRETGLHAAFKSV
FPIVSYSGNAALEYVSYRIGEPVFDVKECQLRGVTYAAPLRVKVRLIIYDKESSNKAIKD
IKEQEVYMGEMPLMTENGTFVVNGTERVIVSQLHRSPGVFFDHDKGKTHSSGKLLYSARV
IPYRGSWLDFEFDPKDAVFVRIDRRRKLPASILLRGLGYTSEQMLEMFFETSKFSLGAEV
CKLELVPSRLRGDIATFDIKDNDGNVIVEEGRRITARHIKQLEKAGITELEVPTEYLYGR
VLAKDMIDQSTGEVLVECNTELTEEVVTKILDAGVKDIETLYTNDLDCGPFMSDTLRIDP
TRTPLEALVEIYRMMRPGEPPTKESAENLFNNLFFSEERYDLSAVGRMKLNRRLGREEST
GEGTLTHDDIIDVLKTLIAIRNGQGQVDDIDNLGNRRVRCVGEMAENQFRVGLVRVERAV
RERLSLAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARSNSYGFLESPYRKVV
DGVVTDEVVYLSAIEESNYVIAQASAATDEGKRLTDELVTVRHQNEFTVAPPEAVNFMDV
SPRQVVSVAASLIPFLEHDDANRALMGANMQRQAVPTLKSQVPLVGTGVERTVAQDSGVC
VTARRGGVIESVDAARIVVRVNNEETEAGDAGVDIYNLTKYTRSNQNTCINQRSIVRQGD
VIARGDVLADGPSVDLGELALGQNMRIAFMPWNGYNFEDSILISEKVVQEDRLTTIHIQE
LTCVARDTKLGSEEITADIPNVGESALSKLDESGIVYIGAEVGPGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSQRVPTGTRGTVIDVQVFTRDGIEKDARALSIEKEQLDK
YRKDLKDEYRIVEGATFERLMAALKGQEVISGPGLKKGAKLEEAYLAELPRADWFKLRMK
DEALNELLEKSEQGLEDRKKEHEARFDDKKGKLQQGDDLAPGVLKIVKVYLAIKRRIQPG
DKMAGRHGNKGVISAVMPIEDMPYDEFGNTVDIVLNPLGVPSRMNVGQVLETHLGAAAKG
LGERISRMLDEQRKVAELRKLLDEIYNHSDEVFKVDLDSLTDKEIFELCNNLRGGVPMAT
PVFDGAKEAEVKRMLELAGLDTTGQTKLYDGRTGDAFDRPVTVGYMYILKLNHLIDDKMH
ARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKM
YKNIVDGDHRMEPGMPESFNVLVKEIRSLGIDIELESE
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgacttactcctacactgagaaaaagcggattcgcaaagactttagtaaattgccttcc
gtgatggaagtcccctatttgctgtcaattcagctggattcgttccgggactacctccaa
atggaaactgcgcctgaagaccgccgggaaactggtcttcatgcagcattcaaatccgta
ttcccgatcgtcagttattctggcaacgccgcgctcgagtatgtgagctaccgaatcggc
gagccagtctttgacgtcaaggaatgtcagctcaggggcgtaacttacgccgcgccgcta
cgggtgaaggtccgcctgatcatttatgataaggaatcgtctaacaaggcgatcaaggac
atcaaagagcaagaagtctacatgggcgaaatgcccctgatgaccgagaacggtaccttt
gttgttaacggtaccgagcgcgttattgtttcccagctccaccgttcacctggtgtgttc
ttcgatcacgacaagggtaagacccattcctccggcaagctgttgtactcagcccgggtg
attccttaccgtggctcctggctggacttcgagttcgatccgaaggacgccgtcttcgtt
cgtatcgaccgccgtcgtaagctgccggcttccattctgttgcgtggcctgggctacacc
tccgagcaaatgctcgagatgttcttcgaaaccagtaagttcagcctgggcgcggaagtg
tgcaagctggagctggtaccaagccgtctgcgtggcgatatcgcaaccttcgacatcaaa
gacaatgacggcaacgtgattgttgaagaaggccgccggatcactgcccgtcacatcaag
cagctggaaaaagccggtatcaccgagctggaagtaccgaccgagtatctctacggtcgt
gtcctggccaaggacatgatcgatcagtctaccggcgaagtgctggtggaatgcaacacc
gaactgaccgaggaagtggttaccaagatcctcgatgccggtgttaaagacatcgaaacc
ctgtacaccaacgacctggattgcggtccgttcatgtcggataccctgcgtatcgacccg
acccgcaccccgctcgaagcgttggtggaaatctaccgcatgatgcgcccgggcgaaccg
cctaccaaggaatctgcggagaatctgtttaacaacctgttcttctccgaagagcgttac
gatctgtccgccgttggccggatgaaactgaatcgtcgcctgggccgggaagaaagcacc
ggcgaaggtacgctgacgcacgacgatatcatcgacgtactgaagaccttgattgccatc
cgtaacggccagggccaggtggacgacattgataacctgggcaaccgtcgtgtgcgttgc
gtgggtgaaatggccgaaaaccagttccgtgttggtctggtgcgtgttgagcgtgcagtg
cgtgagcgtctgagtctcgccgaaagcgaaggcctgatgccgcaggacctgatcaacgcc
aagccggttgcggccgctgtgaaagagttctttggctccagccagctgtcccagttcatg
gatcagaacaacccgctgtccgaggttacccacaagcgtcgtatttccgcgttgggccca
ggtggtctgacccgtgaacgcgccggcttcgaagtccgtgacgtacatccgacccactac
ggccgtgtgtgcccgatcgagactccggaaggcccgaacatcggtctgatcaactcgctg
gcaacctacgcccggtccaactcctacggcttccttgagagtccgtaccggaaggtggtc
gatggtgtggtgaccgacgaggtggtttacctctctgcgattgaagagagcaactacgtg
atcgcccaggccagcgctgctaccgatgaaggcaagcgtctgactgatgagctggttacg
gtgcgtcaccagaacgaatttaccgtagcgcctccggaagcggttaacttcatggacgta
tctccgcgccaggttgtgtcggtcgcggcgtctctgatcccgttcctggagcacgacgat
gccaaccgggccctgatgggtgcgaacatgcagcgccaggcggtcccgaccctgaagtcg
caggtgccgctagtgggtaccggtgttgagcgcacggtggctcaggactctggcgtgtgt
gtaaccgcgcgtcgcggtggcgtgatcgaaagcgtggatgcggcccgtatcgtggttcgc
gtcaacaacgaagaaaccgaagccggtgatgcaggtgtggatatctataacctcaccaag
tacacccgctccaaccagaacacctgtatcaaccagcgttctatcgtgcgtcagggtgac
gtgattgcccgtggcgatgtgttggcggatggtccttctgtggatctgggtgagctggct
ctgggtcagaacatgcgcatcgcgttcatgccctggaacggttacaactttgaggactcc
attctcatctccgagaaagtggttcaggaagaccgtctgaccaccatccacattcaggaa
ctgacctgtgtggctcgtgataccaagctgggcagcgaagaaatcaccgcagatattccg
aacgtgggtgaaagcgcactgtccaagctggatgagtctggcattgtctacatcggcgct
gaagtgggccccggcgacattctggttggtaaggtaacgccgaaaggcgaaacccagctg
accccggaagagaagcttctgcgtgccatctttggtgaaaaagcgtctgacgttaaggac
acatctcagcgtgtgccgaccggtacccgtggtacggtcattgacgttcaggtcttcacc
cgtgacggtatcgagaaagatgcccgagcgctttcgatcgagaaagagcagctggacaag
taccgtaaggacctgaaagacgagtaccgcattgttgaaggtgcgacgttcgagcgtctg
atggccgctctgaaaggtcaggaagtgatcagtggtccgggcctgaaaaagggtgcgaag
ctggaagaagcctacctggcggaactgccgcgagccgactggttcaagctgcgcatgaaa
gacgaagctttgaacgagttgctggagaaatccgagcagggcctcgaggatcgcaagaaa
gagcacgaagctcgctttgacgacaagaagggcaagcttcagcagggcgacgatctggct
cctggcgtactcaagattgttaaggtttacctggcaatcaagcgtcgtattcagccgggc
gacaagatggctggccgtcatggtaacaagggtgttatctctgcggttatgccgattgaa
gacatgccctacgacgagtttggcaataccgtcgatatcgttctgaacccgctcggtgta
ccgtcgcggatgaacgttggtcaggtgcttgaaactcatctgggtgctgcggctaaaggc
ctgggtgagcggatcagccgcatgcttgatgagcagcgcaaggtggctgagcttcgcaag
ttgctggacgagatctacaatcattcggacgaagtgttcaaggttgaccttgacagtctg
actgacaaagagattttcgagctgtgcaacaacctgcgtggtggcgttcccatggcaaca
ccggtcttcgatggtgccaaggaagccgaggtgaagagaatgcttgagttggctggcctg
gatactaccggtcagaccaagctctatgacggccgtaccggcgatgcgtttgatcgtccg
gtaactgttggctatatgtacattctcaagctgaaccacctgatcgacgacaagatgcac
gctcgttctaccggctcttacagcctggttacccagcagccgctgggtggtaaggctcag
ttcggtggtcagcgcttcggtgagatggaagtctgggctctggaggcatacggtgccgcc
tataccctgcaggaaatgctcaccgtcaagtctgacgacgtaaacggtcggaccaagatg
tacaagaacattgtcgatggcgatcatcgtatggagccgggcatgcctgaatccttcaac
gttcttgtcaaggaaatccgctcgttgggtatcgacatcgagctggaatccgagtga
DBGET
integrated database retrieval system
