Marinobacter nauticus VT8: Maqu_2001
Help
Entry
Maqu_2001 CDS
T00454
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
maq
Marinobacter nauticus VT8
Pathway
maq02020
Two-component system
maq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Maqu_2001
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Maqu_2001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maq03000
]
Maqu_2001
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
maq02035
]
Maqu_2001
Transcription factors [BR:
maq03000
]
Prokaryotic type
Helix-turn-helix
Other families
Maqu_2001
Bacterial motility proteins [BR:
maq02035
]
Flagellar system
Flagellar assembly proteins
Others
Maqu_2001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
AAA_7
AAA_22
nSTAND3
AAA
AAA_2
AAA_25
SLFN-g3_helicase
bpMoxR
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
ABM19082
UniProt:
A1U263
LinkDB
All DBs
Position
complement(2229147..2230595)
Genome browser
AA seq
482 aa
AA seq
DB search
MSKNNKVLVLSEDETRRRDLVTILEFVGEEQVISGDEALALLASDDDQAWDSVSVAVVNG
TESGACSAIEQVCRAMTGVPVLLVGDPELKGLSEDDAARVIARMEWPLNYTKFVDSLYRA
QIYRDQFSRNQQRGQQRGVQLFRSLVGTSRKVQQVRQLMEQVADKDVSVLITGESGTGKE
VVARNLHYHSSRRDKPFVPVNCGAIPAELLESELFGHEKGAFTGAITARVGRFEMAEGGT
LFLDEIGDMPLNMQVKILRVLQERTFEKVGSNRTQTADVRVIAATHKHLEDMIESGDFRE
DLYYRLNVFPIEMPALRERVEDIPLLINELISRMEKEKRGSLRMNSAAIMSLCRHDWPGN
VRELANLVERLAIMHPYGVIGVQELPKKFRYVDDYDENRPVEDSGMPSSIPGLVGLDAPA
LLPVNGIDLKDYLSNLEKQLIQQALDEASGVVARAAEKLRIRRTTLVEKVRKYGLRDDSE
EA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaataacaaagtgctggtgctgagtgaggatgaaaccaggcggcgagatctg
gtcaccattctggagtttgtcggtgaagagcaagtgatttccggcgacgaggctttggcg
cttttggcgagtgacgatgatcaggcctgggatagtgtttcagtggcggtcgtcaacggc
accgaatccggcgcctgttccgccatagagcaggtgtgccgggccatgaccggtgtacca
gtgttgctggttggcgaccctgagctcaagggtttgtcagaggacgatgcggcacgagtg
attgcgcggatggaatggccgctgaactacaccaagttcgtggattccctgtaccgcgca
cagatctatcgggaccagttcagccgcaaccagcagcgcggccagcagcgtggtgtgcag
ctgttccgcagccttgtgggaaccagtcgtaaagtccagcaagtgcgccagttgatggag
caggtggccgacaaggatgtgagcgtgctgattaccggagagtccggtactgggaaggaa
gtggttgctcgcaatctgcattaccattcttcccgccgcgataagccctttgtgccggtg
aactgtggtgccattccggcagagctgctggaaagcgagctctttggccatgagaaaggc
gcgtttaccggtgccattacggcgagggtagggcgctttgagatggcggaaggcggcacc
ttgttcctggatgaaattggcgatatgcccctgaacatgcaggtgaagatactgcgggtt
ctgcaagagcgcacctttgaaaaagtgggcagtaaccgcacccagaccgctgacgtacgg
gtgattgcggcgacccacaagcatcttgaggacatgattgaatccggtgatttccgggag
gatctgtactaccggctgaacgtgttccccatcgaaatgccggcactccgggagcgagtc
gaagacattccactgttgatcaacgagctgatttcccggatggaaaaagagaagcgtggt
tcattgcggatgaactcggcggccatcatgagcctgtgtcgtcatgattggccgggcaat
gtccgtgagctggcgaacctcgtggagcgtcttgccatcatgcatccctatggcgtgatc
ggagtgcaggaattgccgaagaagttccgctatgtggatgattacgacgagaatcgcccg
gtagaggattcaggtatgccctcttccataccaggcctggtggggctggatgcgccagcg
ttgcttccggtgaacggcattgatctgaaggattatctctccaatctcgaaaagcaattg
attcagcaggctctcgatgaagccagcggcgtagtcgcccgcgccgccgagaagctacgg
atacggcgcacgacgctggtggagaaagtgcgaaagtatggtctgagggacgactcagaa
gaagcctga
DBGET
integrated database retrieval system
