Marinobacter nauticus VT8: Maqu_2030
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Entry
Maqu_2030 CDS
T00454
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Maqu_2030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maq03019
]
Maqu_2030
03110 Chaperones and folding catalysts [BR:
maq03110
]
Maqu_2030
03029 Mitochondrial biogenesis [BR:
maq03029
]
Maqu_2030
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maq04147
]
Maqu_2030
Enzymes [BR:
maq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Maqu_2030
Messenger RNA biogenesis [BR:
maq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Maqu_2030
Chaperones and folding catalysts [BR:
maq03110
]
Heat shock proteins
HSP60 / Chaperonin
Maqu_2030
Mitochondrial biogenesis [BR:
maq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Maqu_2030
Exosome [BR:
maq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Maqu_2030
Exosomal proteins of other body fluids (saliva and urine)
Maqu_2030
Exosomal proteins of breast cancer cells
Maqu_2030
Exosomal proteins of colorectal cancer cells
Maqu_2030
Exosomal proteins of bladder cancer cells
Maqu_2030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
ABM19111
UniProt:
A1U292
LinkDB
All DBs
Position
complement(2263155..2264807)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVKFGDSARKRMVAGVNILADAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASQANETAGDGTTTATVLAQSIVNEGIKAVTAGMNPMDLKRGI
DKGTAEAVKAIREMAKPCDDSRMIAQVGTISANGDETIGKIIADAMEKVGKEGVITVEEG
RGLEDELDVVEGMQFDRGFLSPYFINNQDNMSAELEDPYILLVDKKISNIRELLPVLEAV
AKAGKPLQIIAEDIEGEALATLVVNNMRGIVKVNAVKAPGFGDRRKEMLQDIAILTGGTV
ISEEVGLTLENTTLDDLGTAKRVNVTKENTTIIGGAGAEADISARVEQIRKQIEDSSSDY
DKEKLQERVAKLAGGVAVIKVGAGSEVEMKEKKARVEDALHSTRAAVEEGIVAGGGVTLI
RAIAALDKVDAINDEQKAGVNILRRAMEAPLRQIVFNAGGESSVVVAKVKEGEGSFGFNA
ATEQYGDMLEMGILDPAKVTRSSLQAAASVASLIITTEAMVADEPEDDKAGGGMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgttaaattcggtgatagcgcacgtaagcgcatggtagcaggtgtt
aacatcctggcggacgcggtcaaggtaacactgggccccaaaggtcgtaacgtggttctg
gagaagtcgttcggcgctccgaccgtgaccaaggacggcgtgtctgtggccaaggaaatc
gagctgaaagacaagttcgagaacatgggcgcgcaaatggtgaaggaagtcgcttcccaa
gccaacgaaactgctggtgacggtaccacgacggcgaccgtactggcccagtccatcgtg
aatgagggtatcaaggccgtgactgccggcatgaacccgatggacctgaagcgtggtatc
gacaaaggtaccgccgaagctgtcaaagccatccgtgaaatggccaagccctgcgacgac
agccgcatgatcgcccaggtcggtactatctccgccaacggtgacgagaccatcggcaaa
atcatcgccgacgccatggaaaaagtcggtaaagaaggcgtcattaccgttgaggaaggc
cgtggcctggaagacgagctggacgtggttgaaggcatgcagtttgaccgcggtttcctg
agcccgtacttcatcaacaaccaggacaacatgtccgccgagctggaagacccgtacatc
ctgctggttgacaagaagatctccaacatccgcgaactgctgccggtgctggaagcggtt
gcaaaggcgggtaagccgctgcagatcatcgctgaagacatcgaaggcgaagccctggct
actctggtggtcaacaacatgcgcggcatcgtgaaggtcaacgctgtgaaggcgccgggc
ttcggtgaccgtcgcaaggaaatgctgcaggacatcgccattctgactggcggtacggtg
atttccgaagaagtcggcctgaccctggaaaacaccactctggatgacctgggtactgcc
aagcgcgtcaacgtgaccaaggaaaacaccaccatcatcggtggcgctggtgccgaggca
gatatcagcgctcgcgttgagcagatccgtaagcagatcgaagacagcagctcggattac
gacaaagagaagctgcaagagcgcgttgccaagctggctggcggtgtcgccgtcatcaaa
gtgggcgccggctctgaagttgaaatgaaagagaagaaggcccgcgttgaagacgctctg
cactccacccgcgctgccgtcgaagaaggcatcgtagctggtggtggtgttaccctcatc
cgcgctattgcggctctggacaaggtagacgccatcaacgacgagcagaaagccggtgtg
aacattctgcgtcgcgccatggaagctccgctgcgtcagatcgtattcaacgcaggcggt
gagtcttctgtggtggttgccaaggtaaaagaaggcgaaggctccttcggcttcaacgct
gctaccgagcagtacggcgacatgctggaaatgggtatcctcgatcccgccaaggtaacc
cgttcttccctgcaggcagcggcttctgtcgcttctctgatcatcaccaccgaggcgatg
gttgcagacgagccggaagacgacaaagccggcggtggtatgccggatatgggtggcatg
ggcggaatgggaggcatgggcggcatgatgtaa
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integrated database retrieval system
