Marinobacter nauticus VT8: Maqu_2602
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Entry
Maqu_2602 CDS
T00454
Name
(GenBank) Exodeoxyribonuclease I subunit C
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Maqu_2602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_2602
Enzymes [BR:
maq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Maqu_2602
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Maqu_2602
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Maqu_2602
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Maqu_2602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABM19677
UniProt:
A1U3V8
LinkDB
All DBs
Position
complement(2928204..2929652)
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AA seq
482 aa
AA seq
DB search
MIRSFYWHDYETFGVDPVHDRPSQFAGVRTDADLNIIEDPLVIYCKPADDYLPSPEACLI
TGITPQKALEDGFPEAEFIAQINAAFSQPGTCAVGYNSLRFDDEVTRHTLYRNLRDPYAR
EWQNGNSRWDIIDMVRLTYALRPEGINWPRKEDGSPSFRLEELTVANGIAHEAAHDAMSD
VLATIAVAKLIKEKQPKLFDFVLNNKDKHSARQMLDTASMKPVFHISAKYPAARGCCALV
APLAESLSNKNQVIVYDLREDPEALINASVEEIRERVFTSQAELGEGVSRFPLKGVQLNK
CPVLAPATMLSTLSQERLAELELDGDVLRANLAKLRKAPDLPARVAQAFEQDFQGSDLTD
PDEQLYAGGFISKTDREKLNWLLTQPVDTLAEQEMSFEDPRLPEMLFRYRARNYPDTLIG
EEMERWEQFRTERLMQPKKGWRSLEAYGQELQRLAADTELTPRKQQILEDLHLYGESLIP
YM
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgctctttctactggcacgattacgaaacctttggcgtagacccggttcatgac
cggccctcccagtttgcgggtgtgcgcaccgatgcggatctgaatatcatcgaagacccg
ctggtgatctattgcaagccagccgacgattacctgccttctcctgaagcctgcctgatt
accggtattactcctcagaaagcgctggaggacggatttccggaagcggagtttatcgcc
cagattaacgcggctttcagtcagcctggcacctgcgccgtaggctataacagcctgcgt
tttgatgatgaagtcacccgccatacgctttaccgtaatctccgggatccctatgcccgg
gaatggcagaacggcaattcccgctgggacattattgatatggtgcggctgacttatgct
ttgcggcccgaaggtatcaactggccccgcaaagaagatggcagcccgagtttcaggctg
gaagagctgacagtagccaatggcattgctcatgaggctgcccacgatgccatgtcggat
gtgctggccaccattgccgtggcaaagctgatcaaggaaaagcagccaaaactgtttgat
ttcgttctgaacaacaaagacaaacactccgcacggcaaatgctggacacggcgagcatg
aagccggtgtttcatatttctgccaagtacccggcagcaaggggttgttgtgcgctggtg
gcgccgttggcagagagcctgagcaataagaaccaggtgatcgtttacgatcttcgggaa
gacccggaggcgctgattaacgcctcggtagaagagatccgtgagcgggtatttacgtct
caggcggaactgggggagggcgttagccgctttccactgaaaggtgtgcaactgaacaaa
tgcccggtattggcgccggcgaccatgctctccacgctgtcacaagagcggttggccgag
ctggagctggatggagacgtactgcgggccaacctggccaaactgcgcaaagctccggac
ctgcccgcccgtgttgcccaggcattcgaacaggattttcagggcagcgacctgaccgat
cccgacgagcaactttacgctggcggttttatcagcaaaaccgaccgggagaaactcaac
tggttgctgacccaacccgtggataccctggccgagcaggaaatgagctttgaagacccc
cgcttgccggagatgctgttccgttaccgggctaggaattatccggataccctgattggc
gaggaaatggagcgctgggagcagtttcgtaccgaacggttgatgcagccgaaaaaagga
tggcgctcactggaagcctatggtcaggagctacagcgattggcagctgatacggagctg
acgcccaggaagcagcagatactggaggacttacatctctatggcgaatccctgattccc
tatatgtaa
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