Marinobacter nauticus VT8: Maqu_2959
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Entry
Maqu_2959 CDS
T00454
Name
(GenBank) type III restriction enzyme, res subunit
KO
K19789
DNA repair protein RadD
Organism
maq
Marinobacter nauticus VT8
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_2959
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Maqu_2959
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
SLFN-g3_helicase
AAA_30
AAA_16
AAA
AAA_22
Zn_ribbon_3
DZR
zf-tcix
CobA_CobO_BtuR
T1R_D3-like
SNF2-rel_dom
DUF7577
Motif
Other DBs
NCBI-ProteinID:
ABM20033
UniProt:
A1U4W4
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All DBs
Position
complement(3294969..3296726)
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AA seq
585 aa
AA seq
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MNGPFTLRPYQQEAVDATLNHFRKSDESAVIVLPTGAGKSLVIAELARLARRKILVLTHV
KELVEQNHAKYQSYGLSGGIFAAGLKRKENHHQVTFASVQSVAANLDQFRDEYSLVIIDE
CHRVSGEETSQYQRIIELLRQQNDSLKVLGLTATPYRLAMGWIYRYHYRGFDRGSDDEQD
KPFRHCIYELPLSYMINRGYLTRPELVNAAVAQYDFSALTQDRFGEYAEKDVNQLLSKHQ
RVTRAIIEQVMEMAAERQGVMIFAATVQHAQEIAGYLPEQETALVTGATDLRDRDQLIQR
FKQRQLKYLVNVSVLTTGFDAPHVDLIAILRPTQSVSLYQQIVGRGLRLDEGKQDCLVID
YAGNHVNLHHPEVGEPKPNPDSEPVQVFCPGCGFANIFWGKTDSDGRVVEHYGRRCQGLL
ESIEDDAGRPQQCDYRFRFKECPHCGGENDIAARNCGHCHQAIIDPDDQLRDALKLKDAM
VIRCAGISLAGEGQKLRMTYHGEDGEELRESFDFSKPGQRAVFNKLFGRRFANGQAPKVF
ARANEVLEMQVLLPVPDFVIARKQKQYWQVQERIFDYRGQYRKAY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcctttcacgctgcggccttaccaacaggaagcggtcgacgccacgctgaac
cacttccgtaaatcggatgaatctgcggtcattgtgctgccgaccggtgccggcaagagc
ctggtaattgccgagctggctcgccttgcgcgccgaaagattctggtcctgacccatgtg
aaggaactggtggagcagaatcacgccaagtatcagagttatggtctgtcggggggaatc
tttgcggccgggctgaaacgcaaggagaaccaccatcaggtgacctttgccagcgtgcag
tcggtggcggcgaatctggaccagttccgggatgaatactcgctggttattatcgatgag
tgccaccgggtgagtggcgaggaaaccagccagtaccagcggatcatcgagcttttacgg
cagcagaatgactccctgaaggtgcttgggctcactgctactccctaccgcctggccatg
ggatggatctatcgttaccactaccggggttttgatcgtggctccgatgacgagcaggac
aagcctttccggcactgcatctacgaattgcccctgagttacatgatcaaccgtggttac
ctcacccggcctgaattggttaacgcggctgtggcccaatacgatttctccgcactcacg
caggaccgctttggcgaatacgccgagaaagacgtcaaccagttgttgagcaaacatcag
cgggtgacacgtgccatcatcgaacaggtgatggagatggcggccgagcgccagggggtg
atgattttcgcggcgacagtgcagcacgcgcaggaaattgccgggtatttgcctgagcag
gaaaccgccctggtgaccggcgcgactgatctgcgagatcgcgaccagctgatccagcgc
ttcaagcaacggcagttgaagtacctggtgaatgtgtctgtgctgacgaccggatttgat
gctccccatgtggacctgatcgccatcttgcggcctactcagtcggtaagcctgtatcag
cagattgtcggccgaggcctgcggttggatgaggggaaacaggattgcctggtgattgat
tacgccggcaatcatgtcaacctgcaccacccggaagttggggagccgaagcccaaccct
gacagtgaaccggtgcaggtgttctgcccgggctgcggttttgccaacatcttctggggc
aaaaccgacagcgacggtcgtgtcgttgagcactatggccgtcggtgccagggcctgctg
gaatccatagaagacgacgctgggcggccacagcaatgcgactaccggttccggttcaag
gaatgtccacattgcggtggcgagaacgacatcgctgcccgcaactgcggccactgtcac
caggcgattatcgatccggatgatcagctgcgggatgccctgaagctcaaggatgccatg
gtcatccgctgtgccggcatttctctggcgggagaaggccagaaacttcggatgacctac
cacggagaagacggggaggaactccgggagtctttcgatttcagcaagccaggccagcgc
gccgtgttcaacaagctgtttggccgacggtttgccaatggccaggctccgaaagtcttt
gcccgggcaaatgaggtgctggagatgcaggtgctgttacccgtgccggatttcgtgatt
gctcgcaagcagaagcaatactggcaagtgcaggagcgaatcttcgattatcgggggcag
tatcgtaaggcctattga
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