Marinobacter nauticus VT8: Maqu_3344
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Entry
Maqu_3344 CDS
T00454
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Maqu_3344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maq03019
]
Maqu_3344
03016 Transfer RNA biogenesis [BR:
maq03016
]
Maqu_3344
Enzymes [BR:
maq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Maqu_3344
Messenger RNA biogenesis [BR:
maq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Maqu_3344
Transfer RNA biogenesis [BR:
maq03016
]
Prokaryotic type
tRNA degradation factors
Maqu_3344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ABM20415
UniProt:
A1U5Z6
LinkDB
All DBs
Position
complement(3697548..3699716)
Genome browser
AA seq
722 aa
AA seq
DB search
MGHWPESKPLKMQEFIVELQPRIKTFEMGGETFTLETGRIARQATGAVLVSTGDTAVLGT
VVGAKEPKPGQGFFPLTVNYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLF
PNGYMNEVQVVLTVMSASKNHDPDIAAMIAASAALAISGIPFDGPIGAARVGYTNEKGYF
LNPTFEELSTSLLDMVVAGTDEAVLMVESEAKGLTEDQMLGAVLFGHQEMQTAITAIKEF
AAENGKPRWEWQPEAENTELLNAIKAEFGGAIEEAYAIRDKMARYERLGEIKSAAVEKLA
GEEEGQPSEEEVKKYFGKVEKSVVRLQVIEGKPRIDGRDNKTVRPIKVEVGVLPSVHGSA
LFTRGETQAIVTATLGTTRDVQIIDALEGERKDPFLFHYNFPPYSVGEAGRMGSPGRREI
GHGRLAKRGVAAVMPTIEEFPYAIRAVSEITESNGSSSMASVCGSSLALMDAGVPLKAPV
AGIAMGLVKEGDKFAVLTDILGDEDHLGDMDFKVAGTKEGVTALQMDIKIQGITDEIMEI
ALEQANAARLHILDEMNKVIAEPRAELSDRAPSITTIKIHPDKIRDVIGKGGATIRGICD
ETGASIDLDDDGNVKIYADNAAAAQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNI
LPGKDGLVHISQISERRIENVTDELSEGQEVLVKVLDVDNRGRVKLSMKEVKEGEQPTDF
AD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgggtcattggccagaatcaaaaccgctgaaaatgcaggagtttattgtggaactgcaa
ccacgtatcaagacatttgaaatgggtggggaaaccttcaccctggaaaccggtcgtatt
gcccgtcaggcaaccggcgcggtactggtaagcaccggcgacactgccgttctaggcacc
gttgttggcgccaaagagcccaagccgggccagggcttcttccccctgactgtgaactac
caggaaaaaacctacgccgccggtaaaattccgggcggctttttcaagcgtgaaggtcgt
ccgtccgagaaagagacgctgacctcccgcctgatcgaccgtccgattcgcccgctgttc
ccgaacggctacatgaacgaagttcaggttgtgctgacggttatgtctgccagcaagaac
cacgatccggatatcgctgccatgattgctgcatctgcagccctggccatctccggtatc
ccgttcgacggcccgattggtgctgcccgtgtgggttacaccaacgagaaaggctacttc
ctgaacccgaccttcgaagagctcagcacttccctgctggacatggttgtggccggtacc
gacgaagcggtgctgatggttgagtccgaggccaaaggcctgacagaagaccagatgctg
ggcgccgtactgttcggccaccaggaaatgcagactgcgatcactgccatcaaggaattt
gctgccgagaacggtaagccgcgctgggaatggcagcccgaggcggaaaacaccgagctg
ctgaacgccatcaaggccgagttcggtggtgccatcgaagaagcctacgcgattcgcgac
aagatggcccgttacgagcgtctgggtgagatcaaatctgctgccgttgagaaactggcc
ggtgaagaagaaggccagccttccgaagaggaagtgaagaagtacttcggtaaggtcgag
aagtctgtcgttcgtctgcaggttatcgaaggcaagccgcgtatcgatggccgtgacaac
aagaccgttcgcccgatcaaggtggaagttggcgtactgccgtccgttcacggttccgcc
ctgttcacccgtggtgagacccaggctatcgttaccgctacgctgggtaccacccgtgac
gtgcagatcatcgatgccctggaaggtgagcgcaaggacccgttcctgttccactacaac
ttccctccgtactccgtaggtgaagctggccgtatgggtagcccgggccgtcgtgaaatt
ggtcacggtcgtctggccaagcgtggtgtagccgcggttatgccgaccatcgaagagttc
ccgtatgccattcgtgcggtgtccgagatcactgaatccaacggttccagttccatggct
tccgtgtgtggttcttccctggcgctgatggatgctggtgtgccgctgaaggctccggtg
gccggtatcgccatgggtctggtcaaggaaggcgacaagttcgcggtcctgactgacatc
ctgggtgacgaagatcacctgggtgacatggatttcaaggttgccggtaccaaagagggc
gtcacggccctgcagatggacatcaagattcagggtattaccgacgaaattatggaaatc
gccctcgagcaggccaacgctgcgcgtctgcacatcctggacgagatgaacaaggtgatc
gccgagccccgtgccgagctgtctgatcgcgctccgagcatcaccaccatcaagattcat
ccggacaagatccgtgatgtaatcggtaagggtggcgcaaccatccgtggtatttgcgac
gagaccggcgcttccatcgacctggacgacgacggcaacgtgaagatctacgccgacaac
gctgcggccgcacaggctgccgtgaatcgcgtgaaagaaatcactgccgagatcgaagtg
ggtgctatctacaagggccgcgttgagcggattgtggacttcggtgcctttgttaacatc
ctgcccggcaaggatggtctggtgcacatttcccagatctccgagcgccgtatcgagaac
gtcactgacgagctgagcgaaggtcaggaagttctggtcaaggtgctggatgtggacaac
cgtggtcgcgtcaagctgtccatgaaggaagtcaaagaaggcgagcagcctactgacttc
gctgactaa
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